Gossypium hirsutum (upland cotton): 107893156
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Entry
107893156 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107893156
04121 Ubiquitin system [BR:
ghi04121
]
107893156
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107893156
Membrane trafficking [BR:
ghi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107893156
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107893156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_10
zf-HC5HC2H
GAS2
Motif
Other DBs
NCBI-GeneID:
107893156
NCBI-ProteinID:
XP_016673571
UniProt:
A0A1U8I5T8
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All DBs
Position
A13:complement(102580396..102582350)
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AA seq
338 aa
AA seq
DB search
MGDRMLVGRYWCYICSQMVNPTMEPEIKCPFCESGFVEEITSVTPYSNNNNGGNDSAGST
NNLLLWGPILLGLIGGLGSSQLRITGRAQINDGNDAMDDELGREFESLVTRRRRRTLGPG
IRILQDIRTESENAENEGSDRGGRMILFDPFNDEALIVQGSFGFNHGQSSNPRATISFSD
YLMGPGWDLLLQYLADNDPNRHGNPPAKKEAVKAMPNVTIDDNLQCCVCLEEIEIGSQAK
EMPCKHKFHGGCITPWLDLHSSCPICRFRLPSDEEKMDENGTGQSSGRVGNRRRYWIPIP
WPSEGLLTLSGSSQNAASSSASLEAMPGSSSAAQTDDN
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgggggataggatgctagtaggtagatattggtgttacatttgttctcagatggtgaat
ccaacaatggaacctgagatcaaatgcccattttgtgaatctggatttgttgaagaaatc
accagcgtaacaccttactccaacaacaacaatggcggaaacgattcagcaggctcaacc
aacaatcttttactttggggtccaatcttgcttggcttgattggtggtttaggttcttca
cagttgcgaatcacaggcagggcccaaatcaatgatggcaatgatgccatggatgacgaa
cttggtagagagtttgaatccttggttactaggagaaggaggaggactttgggtccgggt
attcggatacttcaagatattcgaaccgaatcggagaatgcagagaacgaaggttccgat
cgaggcggtcgaatgatcttattcgatccttttaatgacgaggcattgattgttcaaggc
tcatttggtttcaaccatggacaaagctcaaatccaagggcaaccatttcatttagtgat
tacttaatgggacctggttgggatcttttgttacagtatttagcagacaatgatccgaac
cgccatgggaacccaccagcaaagaaagaagcagtgaaagcaatgccaaatgtgaccata
gatgacaatctacaatgttgtgtgtgcttggaagaaattgagattggaagtcaagcaaaa
gagatgccatgtaaacataaattccatggtggatgcattactccatggttggaccttcat
agctcttgccccatttgccgcttccggctgccttctgacgaagaaaagatggacgagaat
ggcaccggccaaagtagtgggagggtggggaacagacgaaggtattggataccaattcca
tggccttctgagggtttattaacattatcaggttcatctcaaaatgctgcttcttcaagt
gcttcattggaagccatgcctggaagttcaagtgcagctcaaacagatgataattga
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