Gossypium hirsutum (upland cotton): 107893188
Help
Entry
107893188 CDS
T04793
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''delta isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
ghi04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107893188
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107893188
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107893188
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107893188
03036 Chromosome and associated proteins [BR:
ghi03036
]
107893188
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107893188
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107893188
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107893188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
107893188
NCBI-ProteinID:
XP_016673603
UniProt:
A0A1U8IBD9
LinkDB
All DBs
Position
A13:complement(103389626..103396411)
Genome browser
AA seq
539 aa
AA seq
DB search
MEAVVVGDITCLDAELLHLQEMSPLALKSYPEFTQKLFEQWLSLPEANKLVTSLVNDAKA
GNPLNVSANTSGGGSPSSNSLPSMFPAGSAPPLSPRSTSGSPRITKQRAGLSNLGSPLKV
VSEPVKEFIPQFYFKNGHPPPNDLKEQYMSRISQFFAGHPEGLQLQEFKLVTKEVCKLPS
FFSPSLFKKIDVNSTGLVTRDAFVDYWVNGNLLTKDVATQIYTLLKQPYLNYLVQDDFKP
LLQELLATHPGLEFLQSTPEFQERYAETVIYRIYYYINRSGTGHLTLRELKRGNLIDAML
HCDEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIF
SQVPRKFTSKVEGKMGYEDFVYFILAEEDKSSEPSLEYWFKCIDLDGNGVLTRNEMQFFY
EEQLHRMECMAQEPVLFEDILCQMIDMIKPQDESYIMLRDLKGSKLSGSVFNILFNLNKF
MAFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEDDVEDASNGSAEVWDESLEAPF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagttgttgttggagatataacgtgtttagatgcggagctattgcatctccag
gagatgtctcctttagctctcaaatcctatcctgaattcactcaaaagcttttcgaacag
tggctttcgcttcctgaagctaacaagctggtaacatcattggttaatgatgcaaaggct
ggtaatcccttgaatgtttctgcaaacacttccggtggaggctctccctcaagcaattcg
ttaccttccatgtttcctgctggcagtgctcctcccctttcaccaagaagtacatctggt
tcgcctcgtataacaaaacaaagggctggtctttcaaacttgggttctcccctgaaagta
gttagcgagcctgtgaaagagtttatacctcagttttacttcaaaaatggccatccacct
ccaaatgatctaaaagaacaatatatgtctcgaatcagtcagttctttgctggccacccg
gagggactacaactgcaagaattcaaactagtgaccaaggaagtttgcaaactgccttca
tttttctccccatcacttttcaaaaaaattgatgttaatagcactggtttggtcacaaga
gatgcatttgttgattattgggtcaatggaaacttgttgacgaaggatgtagcaactcaa
atttatacattactaaaacaaccatatctcaattaccttgttcaggatgacttcaaacct
ttacttcaagaactattggcaactcatcctgggttggagttcttacagagtacacctgag
tttcaggaaagatatgctgaaactgttatatacagaatatattactacataaatagatct
gggactggtcacctcactcttagagaattgaaacgtgggaacttgattgatgccatgcta
cattgtgatgaggaagaggacattaataaagttttgaggtacttttcgtatgagcatttt
tatgtaatatactgcaagttttgggagctggatacagatcatgatttcttgattgacaag
gagaaccttatcagatatggtaaccatgcgcttacctaccgaattgtcgatagaatattt
tctcaggtcccaagaaagtttaccagtaaggttgaaggaaagatgggttatgaagatttt
gtttacttcatccttgcagaggaggacaagtcatctgagcctagtcttgagtattggttc
aagtgcatagatttggatggcaatggagttctaactcgtaatgaaatgcaattcttttat
gaggagcagttgcaccgaatggaatgcatggcacaggagcctgtgctctttgaggacatc
ttgtgtcagatgattgacatgattaaaccgcaggatgagagttatatcatgttgcgtgac
ctgaaaggttctaaactatctggaagtgttttcaatatccttttcaatcttaacaaattc
atggcttttgaaactcgcgatccattcctcattcgtcaggagcgtgagaatcctacattg
acagaatgggaccgttttgcacatcgagaatatattaggctttcaatggaagatgatgtt
gaagatgcctccaatggaagtgcagaagtttgggatgaatcacttgaggctcccttctaa
DBGET
integrated database retrieval system
