Gossypium hirsutum (upland cotton): 107893219
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Entry
107893219 CDS
T04793
Name
(RefSeq) protein transport protein Sec24-like At4g32640
KO
K14007
protein transport protein SEC24
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107893219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107893219
Membrane trafficking [BR:
ghi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
107893219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
107893219
NCBI-ProteinID:
XP_016673647
UniProt:
A0A1U8I622
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All DBs
Position
A13:complement(103967330..103990064)
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AA seq
1040 aa
AA seq
DB search
MATPMPSGVPRQPPPQTDNPNFQQKQESLPDDLQKWNPNKPSPFPGSAPTLPPLVRPPPS
SSTSAPSQPNSRPGAPPPLVVPGPNVPPNVGSVRPFGPPNGPPSPFRSPSGPPSPFGPPS
GPPSPFGTRPPPGSLPSSMGGGPVISPRGSGAPGPGGRPGAFGSSSRNGPPVGVPPPMMV
TGRSPGPAPSMGPFVGSPQASPKPGPPTQSAPPFSAPLAAPFGTQTWAPGQVAPPTAAPN
AAVQPPRMFGMPPPQPNQPLPAIDQTGASLEDARKINSNQIPRPTTSYSKIQYDTRQGNQ
ANIPPPASCDYIVKDTGNCSPRYMRCTIHQVPCTADLLTNCGMELALMVQPLAPLHPSEE
PIPVVDFGEGGPIRCSRCKGYINPFMRFTDHGRQFICNFCGCVGSTPHEYQCNLGPDGRR
RDADERPELCRGTVEFVATKDYMMRDPMPAVYFFLIDVSMNAIRTGATAAACAAISQVIA
DLPEGPRTMLGIATFDSTVHFYNLKRVLHQPLMLIVPDVHDVYIPLETDVVVQLSECRKH
IEQLLESIPTMFQDNSTAESAFVAAIKAAFLAIKSSGGKLLVFQSVLPSVGMIALSARDA
EGRGNISAGEKEPHKPLQPADKALKTMAIEFAECQVCVDVFTTTQTYVDIASISVIPGTT
GGQVYYYYPFSSISDPVKLYNDLRWNITRPQGFEAVMRVRCSQGIDVKEYHGNFCKRIPT
DVDLPGIDSDKAIVVTLKHDDKLQDGSECAFQCALLYTTVYGQRRIRVSTLSLPCTRNIT
NLFRATDLDAQFVCSLKQVANEIPFTPLLQIREQVTNICINKLLAYRKFCTTATTSGQFI
LPEALKLLPLYTLALTKSTGLQTDVKIDDRSFWINYVSHISTPSAVCLVLPQMIAVHNLD
FDKQEENGSAIPPVLPLSSEFVSEEGIYLLENGVNGLIYIGSLVDSNIVRQLFGFSTVEE
TPTQFALQQYDNPLSKKLNDVVNEIRHQRCSYLRWTLCRKGDASGALFFSYLIEDATPKD
GPSYSEFLAHLHRSIQAKMS
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcctatgccatcgggggtaccaaggcaacccccacctcagactgacaatcca
aatttccagcaaaaacaagaatctttaccagatgatttgcagaagtggaatccaaataag
ccatctccgtttcccggttcagccccaacgcttcctccgttagtaagaccaccaccaagc
tcttccacatcggctccttcccagccaaattcccgccctggtgcaccacctccattggtg
gttcctggacccaatgttcctccaaatgttggttcagttaggccatttgggccaccaaat
ggaccgccttcgccttttcgttcaccaagtggaccgccttcgccttttgggccaccaagt
ggaccgccttcgccttttgggactagaccacctccagggtctttaccttcttcaatgggg
ggtggtcctgtcatcagtccacgaggttcaggtgcacctggacctggtggtcgtccaggt
gcttttggtagttcgagtagaaatggtccacctgttggggtgcctccaccaatgatggtg
actggtaggtctcctggcccggctcctagtatggggccttttgttgggagtcctcaggcc
agtcctaagccaggtcctcctacgcaatctgctccgcctttttcagcgcctctggctgct
ccttttgggactcagacatgggcccctggtcaggttgctccacctacagcagcacctaat
gctgctgttcagccgcctagaatgttcggaatgccaccaccacaaccgaaccaaccatta
cctgccattgatcaaactggtgctagcctggaagatgcacgtaagattaattcaaatcaa
attccaaggcctactacaagttattctaaaattcagtatgacactcgtcaaggcaatcaa
gccaatattcctccgcctgcttcttgtgattacattgtcaaggacactggaaactgcagt
ccacgctatatgagatgcacaatccatcaggttccttgtactgcggaccttttaaccaat
tgtggcatggaattagccttaatggttcagcctctggcccctcttcacccatctgaagag
cccattccggttgtggattttggtgaaggtggtccaattcgatgctctcgttgcaaaggc
tacataaaccctttcatgaggtttactgatcatggcaggcagttcatctgcaacttttgt
gggtgtgttggttccactccccatgagtatcagtgcaatctaggtcctgatggtaggcgt
agagatgctgatgaaagacctgagctatgtaggggcactgttgaatttgttgccacgaag
gattatatgatgcgagatccaatgcctgctgtgtatttctttctcatcgatgtttccatg
aatgcaatacggactggtgcaactgctgcagcatgtgctgcaatcagccaagtcattgca
gaccttccagaaggtcctcggacaatgttgggaattgcaacatttgactcaactgttcat
ttttataatttgaaacgtgtactgcatcagccactgatgctaattgttccagacgtgcat
gatgtttatattcctcttgaaactgatgttgttgttcagctttcggagtgtcgtaaacat
atagagcaattgctggaaagcattccaaccatgtttcaggacaacagcactgctgaatca
gcttttgttgcggcaatcaaggctgctttcctggcaattaagagttctggagggaaactt
ttggtatttcaatcagtcctaccatcagttggcatgattgcactttctgcacgagatgct
gaaggaagaggtaatatttctgcaggagaaaaggagcctcataaaccactccaaccagca
gacaaagctttaaagacaatggcaattgaatttgcagagtgccaggtctgcgtggatgta
tttaccactacccagacttacgtagacattgcttccatttctgttatcccaggaactaca
ggagggcaggtttattactattatcctttctcatccatatctgatccggtaaaactttac
aatgatcttagatggaatattacaaggcctcaaggttttgaggcagtgatgcgtgtgaga
tgcagccagggcattgatgtgaaagaataccatgggaacttttgcaaacgcattccaaca
gatgttgacctaccagggatagactctgacaaagctatagtggtaactttgaaacatgat
gataaactgcaggatggatcagagtgtgcttttcagtgtgctcttctttataccactgtg
tacggccaaagaagaatccgggtttcaactttgtctttgccatgcacaagaaacattact
aacttgttccgagcaactgacttagatgcacaatttgtatgttctttgaagcaagttgca
aatgaaataccttttactccactcttgcaaatacgggaacaagtcacaaacatttgcatc
aataaattgctcgcataccgtaaattttgcaccacagcaacaacctctgggcagtttatt
cttcctgaagcactaaagctgttgcctctatacactcttgcactaactaaaagtactgga
ctgcaaactgatgtgaaaatagatgatcggtctttctggatcaattatgtttcccacatt
tctactccttcggcagtttgtctagtgctccctcagatgattgcagttcacaaccttgat
ttcgataaacaggaagagaatggatctgcaattcctccagtacttcctctttccagtgaa
tttgtgagtgaggagggcatttatcttcttgaaaatggtgttaatggcttaatatacatt
gggagcttggtggattcaaatatagtgcgacaactatttggcttttctacagttgaagaa
acacctacccagtttgcactgcagcaatatgataatccattatccaagaagctaaatgat
gtggtcaacgaaataaggcaccaacgttgctcctatctccgatggactttgtgcagaaaa
ggagatgcatcaggagcattgttcttctcgtatttgattgaagacgcgactccaaaagac
ggtccttcatattctgagtttctagcacatctccatcggagcattcaagcaaaaatgtct
taa
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