Gossypium hirsutum (upland cotton): 107893231
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Entry
107893231 CDS
T04793
Name
(RefSeq) calreticulin isoform X2
KO
K08057
calreticulin
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
ghi04145
Phagosome
ghi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107893231
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107893231
04148 Efferocytosis
107893231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ghi03110
]
107893231
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ghi04091
]
107893231
Chaperones and folding catalysts [BR:
ghi03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
107893231
Lectins [BR:
ghi04091
]
L-type lectins
107893231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
CDC45
Motif
Other DBs
NCBI-GeneID:
107893231
NCBI-ProteinID:
XP_016673657
UniProt:
A0A1U8I634
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Position
A13:complement(104616232..104643238)
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AA seq
420 aa
AA seq
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MSTTMANHKPFPNFLSLILLSLVAIASAEVFFEERFEDGWESRWVKSDWKKDENMAGEWN
YTSGKWNGDPNDKGIQTSEDYRFYAISAEFPEVNNKGKTLVFQFSVKHEQKLDCGGGYMK
LLSDNIDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNHLIKKEVPCETDQLTHV
YTFILRPDATYSILIDNVEKQTGSLYTDWDLLPPKKIKDPEAKKPEDWDDKEYIPDPEDK
KPEGYDDIPKEIPDPDAKKPEDWDDEEDGEWTPSTIPNPEYKGPWKPKKIKNPNYKGKWK
APMIDNPDFKDDPDLYVFPNLKYVGIELWQVKSGTMFDNILVADDVEYAKKLAEETWGKQ
KDAEKAAFEEAEKKREEESKDDPVDSDAEDEDDADDTEGHESDSDTKSDDDDKEDAHDEL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaaccatggcgaatcacaaaccgttccctaatttcttatctcttattctcctc
tctctcgtcgccatcgcctctgctgaagttttcttcgaagaacgcttcgaagatggatgg
gaaagtcgttgggtaaaatctgactggaagaaagatgagaacatggctggggaatggaat
tacacttctggaaaatggaatggagatcctaatgacaaaggtattcaaactagtgaagac
tacaggttttatgctatttcagctgagttcccagaagttaacaacaagggcaagactcta
gtcttccaattttctgtgaagcacgagcagaagcttgactgtggtggtggctacatgaag
ttgctcagtgataacattgaccagaagaaatttggtggcgacaccccgtacagcatcatg
tttggacctgatatttgcggctacagcaccaagaaagtacatgccattcttacatacaat
gggacaaatcacttaatcaaaaaggaagttccttgcgagactgaccaactcactcatgtt
tatacattcattctccgtccagatgctacctacagcatccttattgataatgttgagaaa
caaactggtagcttatacactgattgggatctcctcccaccaaagaagatcaaggatcct
gaggccaagaagcctgaagattgggatgacaaggaatacatccctgatcctgaagacaaa
aagccagagggttatgatgacattccaaaagagattcctgatcctgatgctaagaagcct
gaagattgggatgatgaagaagacggtgaatggacaccctcaacaattcccaaccccgag
tacaagggcccatggaagccaaagaaaatcaagaaccccaactacaagggcaagtggaag
gcaccaatgattgacaacccagatttcaaggatgatccagatctctatgttttccccaac
ttgaagtatgtcggtattgaattgtggcaggtaaaatctggaacaatgtttgataacatc
ttagttgccgatgatgtagagtatgccaagaaactagctgaagaaacatggggcaagcag
aaggatgctgaaaaggcagcgtttgaggaggcagagaaaaagagagaggaggaatcaaag
gatgacccagttgattccgatgctgaggatgaagatgatgccgatgatactgaagggcac
gagtctgattccgataccaaatcagacgatgatgacaaggaagatgctcatgatgagctc
taa
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