Gossypium hirsutum (upland cotton): 107893284
Help
Entry
107893284 CDS
T04793
Name
(RefSeq) serine/arginine-rich splicing factor SR30
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107893284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107893284
Spliceosome [BR:
ghi03041
]
Common components
Common spliceosomal components
SR proteins
107893284
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_YTH1
RRM_occluded
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
107893284
NCBI-ProteinID:
XP_016673715
UniProt:
A0A1U8I651
LinkDB
All DBs
Position
A13:complement(104493339..104497686)
Genome browser
AA seq
298 aa
AA seq
DB search
MGRSSRTLYVGNLPGDTRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPHDAEDA
IRGRDGYDFDGYYLRVELAHGGRRPSSSVDRHSSYSGSSSRGPSRRTDYRVLVTGLPSSA
SWQDLKDHMRKAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYI
RVKEYDSKYDSRRSYSRSRSPYSRSPSRSCSYSSRSRSRSKSPRARYTSQSPSVSRSVSP
CSHSVSPARSNSRSRSISRSPTPSPRSKHESRTPPNRSPSWSRSCRLSRSRSPSVKSD
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgggccgctcaagccgtacgctctatgtgggcaatctgcctggtgacactcgtttgaga
gaagtcgaagatttattttacaagtatgggcccattgttgatattgacttgaagatccca
ccaaggccacctggttatgcttttgttgagtttgaggatcctcatgatgcagaagatgca
atccgtggtcgagatggctatgactttgatgggtattatttacgggttgaacttgctcat
ggtggtcgaaggccgtcatcatctgtggatcgccatagcagttacagtggtagcagtagc
cgcggaccttccagacgcactgactatcgtgttctggtgactggtttgccttcttctgcc
tcatggcaagacctaaaggatcacatgcgcaaagcgggggatgtttgtttctctcaagtg
tttcgtgatcgtggaggcatgacagggattgtagattacacaaattatgatgacatgaaa
tatgctataaggaagcttgatgactctgagtttcggaatgcttttagccgggcttacata
cgggtgaaggaatatgattcaaaatatgattctaggcgcagctactctagaagtcgtagc
ccgtatagtcgaagccccagtcgtagctgcagttatagtagtaggagcaggagcaggagc
aagtctcctcgggcccgatacaccagtcagtctccatctgtatctagatcggtttcgcca
tgttcccattcagtgtcaccagcccgctccaattcaagatctcgctccatatccagatca
ccaactccatctcctcgcagtaaacatgaaagcagaactccaccaaaccgcagccctagc
tggagccggagttgcagattatctcgttctcgttcaccatcggtgaaatctgattga
DBGET
integrated database retrieval system
