Gossypium hirsutum (upland cotton): 107893341
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Entry
107893341 CDS
T04793
Name
(RefSeq) myosin-17
KO
K10357
myosin V
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107893341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107893341
04131 Membrane trafficking [BR:
ghi04131
]
107893341
03029 Mitochondrial biogenesis [BR:
ghi03029
]
107893341
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
107893341
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
107893341
mRNA cycle factors
P-body specific factors
107893341
Membrane trafficking [BR:
ghi04131
]
Others
Actin-binding proteins
Myosins
107893341
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
107893341
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
107893341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
nSTAND3
CC4_CEP85
XhlA
AAA_22
Flp1_like
CbiA
Motif
Other DBs
NCBI-GeneID:
107893341
NCBI-ProteinID:
XP_016673783
UniProt:
A0A1U8IBX2
LinkDB
All DBs
Position
A13:complement(106979633..106993487)
Genome browser
AA seq
1530 aa
AA seq
DB search
MAAPVNIIVGSHVWVEDPTLAWIDGEVFKISGEDVHVQTTNGKTAVANISKVFPKDTEAP
PGGVDDMTKLSYLHEPGVLHNLAMRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQY
KGAGFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRS
GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLE
RSRVCQISNPERNYHCFYLLCAAPPEVREKFKLGDPKSFHYLNQSSCYALDGVDDAQEYL
ATIRAMDVVGISEEEQEGIFSVVAAILHLGNIDFSKGAEVDSSVIKDEKSRFHLNTTAEL
LQCDVKSLENALIKRVMVTPEEIITRALDPVAAVGSRDALAKTIYSRLFDWLVDKINISI
GQDPNSKQLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN
WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLFQTFKNNKRFIKPKL
SRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQDLLTASKCSFVASLFPPPAEESSKSS
KFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENANIIQQLRCGGVLEAI
RISCAGYPTRRTFYEFIHRFGVLAPEILEGNHDDKVACQMILDKMGLKGYQIGKTKVFLR
AGQMAELDARRAEVLGNAARTIQRLIRTYIARKEFMALRKSAIMLQSHWRGLLACKLYEQ
LRREAAALKIQKNFRRHIARESYLTVRLAAITLQTGLRAMTARNEFRFKKQTKAAIIVQA
ALRCHLAYSYYKSLQKAALTTQCGWRGRVARRELRKLKMAARETGALKEAKDKLEKRVEE
LTWRLQLEKRLRTDLEEEKAQELAKLQDALHAMQVQVEEANARVKKEQEAARKAIEEAPP
VIKETPIIVQDTEKVNSLAAEVESLKASLLSERKAAEEARNACTDVEARSAELQKKLEDS
ERKVDQLQESMQRLEEKLANSESEIQVLRQQALAISPTGKSLTTRQRTMIIPRTPENGNV
TNGETKVSPDTTLAISNVREPESEEKPQKSLNEKQQENQDILIKCISENLGFSGSKPIAA
CVIYKCLLQWRSFEVERTTIFDRIIQTIASSIEIQDNNDVLAYWLSNSSTLLLLLQRTLK
ANGAGSLTPQRRRATSASLFGRVSQGLRASPQSGGLSFLNGRGLSRLDDLRQVEAKYPAL
LFKQQLTAFLEKIYGTIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSQANAAAQQALIA
HWQSIVKSLNRYLDIMKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYV
KAGLAELEQWCYAATEEYAGPAWEELKHIRQAVGFLVIHQKPKKTLNEITKELCPVLSIQ
QLYRISTMYWDDKYGTHSVSSDVIANMRVMMTEDSNNAVSSSFLLDDDSSIPFTVEDISK
SLQKVDISDVDPPSIIRENSGFGFLLPRSD
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcctgttaatattattgtaggttctcatgtatgggttgaagatcccacactt
gcatggattgatggtgaagtttttaaaatcagtggtgaagacgttcatgtccaaacaaca
aatggaaaaactgctgtggcaaatatctcaaaggtttttccaaaagatactgaagcacct
cctggaggtgttgatgacatgacaaaactctcgtatttgcatgaacctggagttctacat
aacttggctatgagatatgaacttaacgaaatctatacatacactggaaacatactgatt
gctataaatccattccaaaggttaccacacttgtatgatactcacatgatggagcaatat
aagggggcaggatttggagagctgagtcctcatgtttttgccgttgcagatgttgcctat
agggcaatgataaatgagggaaaaagcaactccattctcgttagtggagaaagtggtgct
ggtaaaacggagactacaaagatgctcatgcgataccttgcataccttggtggtcgatct
ggagttgaagggcgtacagttgaacaacaagttctagaatcaaatccagttcttgaagcc
tttggtaatgcaaaaactgttaggaacaacaattcaagtcgttttggtaaatttgttgag
ctccaatttgacaagaatgggaggatatctggagcggctgttcgcacatatttgctggaa
cggtctcgtgtttgccaaatttcaaatcctgaaagaaattaccactgtttttaccttctt
tgtgcagcaccgcctgaggttagggaaaagtttaagttgggagatcctaagtctttccat
tacctcaatcaatcaagctgctatgcattggatggggtagatgatgctcaggagtacctt
gcaactataagggccatggatgtagttggaatcagtgaggaagagcaggagggaattttt
agtgttgtggctgccattttacatcttggaaatattgacttttcaaagggagctgaggtt
gactcctccgttatcaaggatgagaaatctaggttccatcttaatacgacagctgaactt
ctccagtgtgatgttaagagcttggaaaacgcattaataaagcgtgtaatggttactcca
gaagaaattattacaagagctctagatcctgttgctgcagttggtagcagggatgcatta
gctaaaaccatctattctcgcttgttcgattggcttgtggataagatcaacatttcaatt
ggacaagatccaaactcaaagcaattgattggagtccttgatatttatggttttgagagc
tttaagtttaatagttttgagcagttttgcatcaattttacaaatgaaaaactgcagcaa
catttcaatcagcatgtttttaaaatggaacaggaggaatacacaaaagaagaaattaat
tggagctacatagaatttgttgataaccaggatgtgttggatttgatagagaagaaacca
ggaggaattattgcacttctcgatgaagcttgtatgtttcctaggtccacacacgagaca
tttgctcagaagttgtttcagacattcaaaaacaacaagcgctttataaagccgaagcta
tctcgtactagttttactatttctcactatgctggagaggtgacttatctggctgatttg
ttccttgacaagaacaaagattatgtagtggctgaacatcaggatctattgacagcctca
aagtgctcctttgtagcttctttgtttcctcctcctgctgaggaatcttcaaaatcatcc
aaattttcatccatcggatcacgctttaagctgcaacttcaatctttaatggagacattg
aattcaacagaacctcactatatcagatgtgtgaagccaaacaatgtcctcaaacctgca
atttttgagaatgccaatataattcagcaattaagatgtggtggtgttcttgaggcaatc
aggatcagctgtgctggatatccgactagaagaactttttatgagtttattcaccgtttt
ggtgtccttgctccagaaattttggaggggaatcatgatgacaaagttgcatgtcaaatg
atcctggataagatgggattgaaaggttaccagataggtaagaccaaagttttccttaga
gctggtcagatggctgagttagatgccagaagggcagaagtgcttggaaatgcagccagg
accattcaaagactaatccggacatatattgcaaggaaggagttcatggcactacgtaaa
tctgcaatcatgctgcaatctcactggcgaggtttattagcctgcaaactgtatgagcag
ttgagaagggaagcagctgcattgaagattcaaaagaactttaggcggcacattgccagg
gaatcttatttaacagtgaggttggccgcaattacattgcagactggcctaagggcaatg
actgctcggaatgaattcagattcaaaaagcaaaccaaggctgcaatcatcgttcaggct
gctttgcgttgccatcttgcttactcttattataagagtctccagaaagcagcactaact
actcaatgtggttggaggggaagggttgctaggagagagctcagaaagctgaagatggcc
gcccgagaaacaggagctctgaaagaagcaaaagacaagctggaaaagcgcgtagaagaa
ctcacatggcgtttgcagcttgagaaacgtttgaggactgatttagaagaggaaaaggcg
caagaacttgccaagttacaggatgctttgcatgctatgcaagtacaagttgaggaggca
aatgctagggtcaaaaaagagcaagaggctgctcgaaaagctattgaggaagctcctcca
gttattaaggagactcctattatagttcaggacacagaaaaggttaactccttagctgct
gaggtagagagtttgaaggcatcattgctatcagaaagaaaagcagctgaggaggcccgt
aatgcttgtacagatgtggaggccagaagtgcagagctgcaaaagaaactcgaagattcg
gagagaaaagtggatcaacttcaggaatctatgcagaggttggaagagaagcttgccaat
tcagaatctgagattcaagtacttcgtcagcaggcactagcaatatcaccaactggaaaa
tctttgactacaagacaaagaactatgattattccgaggacaccagagaatggaaatgtt
acaaacggagaaacaaaggtttcaccggacactactcttgccatatcaaatgtacgtgag
cccgaatcagaggaaaaacctcagaaatccctcaatgaaaagcagcaggagaaccaggac
atattgattaagtgtatttcagaaaatttgggattctctgggagcaaaccgattgctgct
tgtgtcatatacaaatgtcttcttcaatggaggtcatttgaagttgaacgaacaactatc
tttgaccgcatcattcaaacaatagcttcttccattgagatccaggataataacgatgtc
ttagcctattggttatcgaattcatcaacattattactgctgctccaacgcacacttaaa
gcaaatggagctggaagtttgacaccacaaaggcgaagagcaacatcagcttcactcttt
gggagagtgtcccaaggactacgggcctctccgcaaagcggtggactttcgtttcttaat
ggtcgtggacttagtagactggatgacttacggcaagttgaggccaaatatcctgcatta
ctgtttaagcaacagcttactgccttccttgagaagatatatggaacgatcagagacaat
ctaaagaaagagatctctccactgcttggattgtgcattcaggctccaaggacatcccgg
gcgagtttggtgaagggacgttctcaagcgaatgctgctgctcagcaagctttaattgct
cattggcaaagcattgtgaaaagcttgaaccgttatttggatataatgaaagcaaatcat
gtacccccattcttagtccgtaaagtgttcactcaaatattctcattcatcaacgttcag
ctattcaacagtcttcttttgcgacgagagtgttgctcattcagtaacggggagtacgtg
aaagctggtcttgctgaattagaacagtggtgctacgccgcaactgaggaatacgcaggc
ccagcatgggaagaactgaagcacataagacaggctgtaggattcctggttattcatcag
aaaccaaaaaagaccttgaatgagataactaaagaactttgcccggttctcagcatacaa
cagctgtacagaattagcactatgtactgggatgacaaatacggcacacatagtgtgtca
tcagatgtcattgcaaacatgagagttatgatgactgaggattccaacaatgctgttagt
agttctttcctgttagacgatgactcaagtattccgttcacggtggaggacatctccaag
tccctgcaaaaagtagacatatctgacgtcgatcctccatcaataattcgtgaaaattct
ggtttcgggttcttacttccacgttcggactaa
DBGET
integrated database retrieval system
