Gossypium hirsutum (upland cotton): 107893380
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Entry
107893380 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107893380
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107893380
Membrane trafficking [BR:
ghi04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
107893380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
FYVE_2
Motif
Other DBs
NCBI-GeneID:
107893380
NCBI-ProteinID:
XP_016673845
UniProt:
A0A1U8I6I8
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All DBs
Position
A13:complement(106591326..106594059)
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AA seq
484 aa
AA seq
DB search
MARFEGRVSYSSLSEVEKEKNNNAYQFDDDYIDSDWTVPEDKSIVSLGSKSIKKGNPYQF
PADSDEFIDGGYDSSDDVRVSMRNGLEPEVNLKNVLSGLIAIVTGTNKGSPSVSVNQQCQ
SSNVSFLGSGNNGDTCLQSSVYIPSAPPLMEPSGINYNAYKEVLEAEPPEWLPDSSTTVC
MQCSSLFTAITRGRHHCRFCGGIFCRACSKGRCLLPVKFRDRNPQRVCDSCYDRLDPLQG
VLINSISNAAQVAKHDVMDWTCTRGWLNLPVGLSMEHEIYKASTTLRSYCQVAQSSPEKS
IPLAVLKGAKGLAILTVVKAGVLLAYKLGTGLVIARRSDGTWSAPSAIFSVGLGWGAQIG
GELMDFIIVLHDLQAVKTFCSRMHFSLGAGCSAAAGPMGRVLEADLRAGDRGSGMCYTYS
CSKGAFVGVSLEGNIVATRMDTNLRFYGDPYLTSTDILLGTVSRPKAAEPLYVALDDLYS
SLNC
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcaagatttgagggtagggtttcgtattcgtcgctttcagaggtagaaaaggagaaa
aataataacgcctatcaatttgatgatgattatattgattctgattggactgtgccagaa
gataaaagtatcgtctcattaggctcaaagtcgataaagaaaggtaatccttatcagttt
cctgctgattctgatgagttcatcgatggaggatatgattcaagcgatgatgtccgtgta
tccatgcggaatggcttggaaccagaggtgaacttgaagaatgtgttgagtggcttaatt
gcaattgtaactgggactaataaaggctccccgagtgtttcggtgaatcagcagtgccaa
agttctaatgtctcatttctggggtctggaaacaatggggatacctgtttgcaatcctct
gtttatataccgagtgccccgccgcttatggagccaagtgggataaattataatgcatat
aaagaagtgctggaagctgagcctccggagtggcttccagatagttctaccactgtttgc
atgcagtgcagttctctctttacagcaattacgcgtggcagacatcattgccggttttgt
ggagggattttctgtagagcatgttctaagggaaggtgcttgctacctgttaaatttagg
gatagaaatccccagagggtctgtgattcttgctatgatagacttgatccattgcagggt
gttcttattaactccattagcaatgctgcacaagtagcaaaacatgatgtcatggattgg
acgtgcactcgaggttggttgaacttgccggttggtttgtccatggaacatgagatctac
aaagcatccaccaccttgagaagctattgccaggttgctcagtcgagtccagagaaatct
ataccactggctgttcttaaaggagccaaaggcttagctattttaactgttgttaaagct
ggagttcttttagcatacaagctcgggactggtcttgttattgctcgaaggtccgatgga
acatggtctgctccatcagctatattctctgttggtttaggatggggtgctcagattggg
ggtgaactcatggatttcataatcgtgcttcatgatttacaagccgtgaagacattttgt
agtcgcatgcatttttctcttggtgctggctgcagtgctgctgcaggacctatggggaga
gtgctggaagcagatcttcgggcaggagatagaggctctggcatgtgttacacatacagt
tgtagtaaaggggcatttgttggtgtgtcactggaagggaacatcgttgcaacaagaatg
gataccaacctacggttctatggtgatccttatctcaccagtactgacatattactcggg
actgtgagccggccaaaggctgctgaacccttgtatgttgctctggatgatctctactct
agcctaaattgttag
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