Gossypium hirsutum (upland cotton): 107893447
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Entry
107893447 CDS
T04793
Name
(RefSeq) EIN3-binding F-box protein 1
KO
K14515
EIN3-binding F-box protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04016
MAPK signaling pathway - plant
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
107893447
04075 Plant hormone signal transduction
107893447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107893447
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107893447
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_RPS2
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
107893447
NCBI-ProteinID:
XP_016673924
UniProt:
A0A1U8IDP6
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Position
A13:complement(105910895..105914793)
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AA seq
639 aa
AA seq
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MSKLFSFSGSDNFFPGGSIYPNPKESSLFFSLGHHVDVYFPHHKRSRFSPPIVFSGERVE
KKNPSIEILPDECLFEIFRRLPGGQERSSCACVSKRWLTLLSNIHRDEINDNNKGGVVSK
VEDQDVEGDGYLSRVLEGKKATNVRLAAIAVGTASRGGLGKLSIRGSNSTCGVTNVGLRA
ISRGCPSLRVLSLWDSSSVGDQGLCEIADGCHQLEKLDLCHCPAITDKSLLAVAKGCPNL
KDLTIEGCANIGNEGLQALARCCPNLKAISIKDCPLIRDQGIVSMLSSASFTLTKIKLQA
LNITDVSLAVIGHYGKAVTDLSLISLPNVSEKGFWVMGNGHGLQKLKSFAVTSCRGVTDL
GLEAVGKGCPNLKQLCLHKCAFLSDKGLVSFAKTASSLESLQLEECHRITQFGFFGSLLN
CGAKLKAFSLVNCYGIKDLNLGLPSVLPCKSLRSLSIRNCPGFGDASLAALGKLCPQLEH
VELSGLHGISDAGFLPLLETREADLVKVNLSGCVNLSDKAVCIMADLHGWTLEMLNLEGC
KISDASLVAIAKNCQLLSDLDVSKCAITDSGIAALARSNQIKLQILSMSGCSKVSDKSMP
SLLKLGQTLLGLNLQQCKAISSSAVDLLVEQLWRCDILF
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagctattttcttttagtggaagtgataattttttccccggggggtcaatttac
ccaaaccccaaggagtcaagtctctttttctcccttggacaccatgtggatgtatatttt
cctcatcacaagaggtcccgcttcagtccccccattgttttctctggagaaagggttgag
aagaagaatccatcaattgagattctccctgatgaatgcttatttgaaatcttcagacgg
ttacctggaggccaagagaggagttcctgtgcttgtgtttccaagcgctggcttacgctt
ctaagcaacatccacagagatgaaatcaatgataacaacaagggtggagttgtttctaag
gttgaagatcaagatgttgagggtgatggatacctctctagggttttggaagggaagaaa
gcaacaaatgttagacttgctgctattgctgtaggaactgcaagccgtggaggattgggt
aagctttctattagaggaagcaactcgacatgtggagtgactaacgttgggctcagggcc
atttcccgtggatgcccttctctaagggttctttcgttgtgggattcgtcttctgttgga
gatcaaggtctgtgtgagattgctgatgggtgtcaccagctagagaagcttgacctttgc
cactgccctgcaattactgataagtctttgcttgctgttgctaagggctgtcctaatttg
aaggatctgaccattgagggttgtgcaaacattggaaatgaaggcctccaagctcttgct
cgctgttgtccgaatctaaaggctatttcgatcaaagactgtccccttataagagatcaa
ggaattgtgagcatgttgtcttcagcttcatttaccctcacaaaaataaagctccaggcc
ttgaatatcaccgatgtctctcttgctgttataggtcactatggcaaggctgtgactgat
ctttctctcattagtcttccaaatgtgagtgagaagggcttctgggtaatgggtaatggt
catgggctacagaaattgaaatcttttgcagttacatcctgccgtggtgtaacggacttg
ggacttgaagctgtcggaaagggttgcccaaatttgaaacagttatgcctccataaatgt
gctttcttatctgataaagggttggtgtctttcgccaaaacagctagttcactagagagc
ttgcaacttgaggagtgccacaggatcacccaatttgggtttttcggttcccttcttaac
tgtggtgcaaagttgaaggctttttctctcgtgaactgctatggtataaaggacctaaac
ctgggattgccttctgtattgccttgcaaatcccttcgatcactgtccatccgtaactgc
cctggttttggtgatgccagcttggctgcattagggaagttgtgccctcagttggagcat
gtagagttgagcgggcttcatgggatatcagacgctgggtttcttccattgcttgagact
cgtgaggcagatttggtgaaggttaatctcagcggttgtgttaatttaagtgacaaagct
gtctgtatcatggctgatttgcatgggtggactctagaaatgctgaatcttgaaggttgt
aagatcagcgatgctagtttggttgcaattgcaaagaactgtcagttactcagtgatctt
gatgtctccaaatgtgcaatcactgattctggaattgcagctctggctcgttctaatcag
atcaaactgcagatcctttctatgtctggttgctctaaggtctctgacaaaagcatgcct
tcacttctaaaactgggtcagaccctgttggggttaaacctacaacaatgcaaggcaatc
agcagcagcgcagttgacctactcgttgagcagctctggaggtgtgatatccttttctga
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