Gossypium hirsutum (upland cotton): 107893475
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Entry
107893475 CDS
T04793
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 14
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107893475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ghi04040
]
107893475
Ion channels [BR:
ghi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107893475
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
107893475
NCBI-ProteinID:
XP_016673967
UniProt:
A0A1U8I705
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Position
A13:105637366..105640349
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AA seq
707 aa
AA seq
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MESKMKELVRFNNNGSTDIKKPVPVYKATVPLLKTEGGHSDSNSNSRIPKFGKFKVFPED
HEPRKERILDPGSETFLQWNRIFLFWCLVALFVDPLFFYMPSVINKDTTSCMDTDLNLGI
IVTCFRTLADAFYALQIIIKFRTAYESPNSRVFRRGELVTDLHMIASRYLKSDFFIDLLA
ALPLPQIMIWFIIPATRSSHGDYTNNALVLIVLVQYVPPLYLIFPLSSQIIKNTGVVTKT
AWAGAAYNLLLYMLASHVLGASWYLLSVERHVICWKSECKKETSPLQCNPHYLDCGTLGD
GGRRKWENGTVVFTKCHPDNDISFDYGIFEIALTKQVLSSSFLQKYFYCLWWGLQNLSSY
GQALNTSTFVWETLFAILIAILGLVLFAHLIGNMQTYLQSITVRLEEWRLKRRDTEEWMR
HRQLPQDLRERVQCFVQYKWLATRGVDEESILRALPPDLRRDIQRHLCLDLVRRVPFFSQ
MDDQLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGRLESCTTNGGRTGFFNSINL
RPGDFCGEELLSWALLPKSSSNLPSSTRTVRTLVEVEAFVLRAEDLKFVANQFRRLHSKK
LQHTFRYHSYHWRTWGACFIQAAWRRHVKRTMARNLSVMECDQRQQGEEHSVVSSKSSHV
KLNLGVTILASKFAANTRRGAQRMKDVEMPKLQKPLDPDFSAEPDDE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggagtccaaaatgaaggaactagtgaggttcaataacaatggcagtactgatatcaag
aagccagtgccagtatacaaagcaacagtccctttgttgaaaactgaaggaggtcattct
gatagtaatagtaatagtagaattcccaaatttggaaaattcaaggtttttccagaggat
catgagcccaggaaggaaagaatcctagatcctggcagtgaaacattcttacaatggaac
aggatttttctcttttggtgcttagtagctttatttgttgatccattgtttttctacatg
ccttcagtcatcaacaaagacactacatcttgtatggatactgatttaaatctaggaatc
atcgtcacatgtttccgaacactggccgatgcattttacgcattgcaaataatcatcaag
ttccgaaccgcgtatgaatcgcctaactcccgagtattcaggagaggcgaacttgttacc
gaccttcatatgattgccagcaggtacttgaaatcagatttcttcatagatctactagct
gccctccctcttccccagattatgatatggttcattataccagcaacaaggagctcccat
ggtgactatactaataatgcattggtgctgattgttttagtgcaatatgttcccccgttg
tatttaatcttccctttaagctctcagattataaagaatactggtgtcgtcacaaagact
gcttgggctggtgctgcatataatctattgctttacatgttagctagccatgtattaggg
gcatcatggtatttgctgtccgttgaacgacacgtaatatgttggaaatccgaatgcaaa
aaagaaactagccctctgcaatgcaatccccattaccttgactgtggcacattaggtgac
ggtggtcgccggaaatgggaaaacggtaccgttgtgtttactaaatgtcatcctgataac
gatatcagtttcgactacgggattttcgaaattgctttgacaaagcaagtactttcttca
agcttccttcagaagtatttctattgtctatggtggggtttgcagaatttgagctcctat
ggacaagctctaaatacaagtacatttgtgtgggaaaccttgtttgccatactgattgcc
atcttgggtttagttctgtttgcccatttaatcggaaatatgcagacctacctacaatcc
atcactgtgagactagaggaatggaggcttaaacgacgagacaccgaggagtggatgaga
catcgccaactccctcaagacctgcgagaacgtgttcaatgtttcgttcagtataagtgg
cttgcaactcgtggtgtggatgaagaatcgatattacgagccttaccccctgatctccgt
cgagatatccaacgccatctatgtttggaccttgtccggcgcgtcccatttttctcacaa
atggatgatcaactactagatgccatatgtgagcggttagtatcgtctttaagtactcaa
ggaacctacattgttcgggaaggtgaccctgtcacggagatgcttttcattatcagaggg
aggttagagagttgcactacaaatggaggccggaccggtttctttaactcgattaatcta
agaccaggtgatttttgtggcgaggagctactttcttgggctttacttcccaaatcttct
tccaacttgccttcctctacaagaacggtaagaacattagttgaagtggaggcctttgta
ttaagagccgaagatctcaagttcgtggccaaccagtttcgacgtctccacagcaagaag
ttgcaacacacatttaggtaccattcttaccattggaggacatggggtgcctgctttatt
caagcagcttggcgccgacacgtgaagagaacgatggcgagaaaccttagtgtgatggag
tgtgaccaaaggcaacaaggggaagaacacagtgtcgtgtcttcgaagtcttcccatgta
aaactgaatctaggtgtgacaattctagcttcaaagtttgcagcaaatacaaggcgagga
gctcagaggatgaaggatgtagaaatgcctaagttgcaaaagcccctagacccagatttc
tcggcagaaccagatgatgagtag
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