Gossypium hirsutum (upland cotton): 107893508
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Entry
107893508 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107893508
Enzymes [BR:
ghi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
107893508
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
107893508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
TRM5-TYW2_MTfase
Serglycin
FtsJ
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
107893508
NCBI-ProteinID:
XP_040941185
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Position
A13:91959387..91965084
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AA seq
637 aa
AA seq
DB search
MASNKSKGAKSKNQPPKKKQRNDLFIDKKRPTKKDEVLDDVSDGHSEEEEEAGDLLDGDE
QMSDFDDDDVSEISDEDDAPLADDFLQGSDDNEDSGSGSTSGSGSDSDSDETDIEEKSRA
IDEQRAREEKDAQAEMELNIKEESDEFRLPTKEELEAEQQRPPDLANLQMRIKEIVRVLS
NFKDMRQEGTTRKDYIDQLKIDLGSYYGYNEFLIRVLVDMFPVVELMELIEAFEKPRPTC
IRTNTLRTRRRDLADVLSKRGVELDQLSKWSKVGLVVYNSHVPIGATPEYLAGFYYIQSA
SSFLPVMALAPQEKERVVDMAAAPGGKTTYVAALMKNSGIIYANEISEARLKSLTANLHR
MGVTNTIVCNYDGRELPKVLGQNSVGRVLLDSPCSGTGVITKDPSVKTSKSLDDIQKCAH
LQKQLILAAIDMVDANSKSGGYIVYSTCSIMVPENEAVIDYALKKRDVKVVPCGLDFGCP
GYIRFREHQFHTSLENXRRFYPHVHNMDGFFVAKLKKMSNAKKNPINSEDLETIVQTQRP
ENTPIDKDNTEELKQNLKKQGNKRKKESLKKNVLSKNGKVESPPTSKTKKRTETGKVESP
LSSKKRKRRFPSKEEISEAREGKRKAMREKRKQGRKE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaataagagcaaaggagcgaaatcaaagaaccaacctccaaaaaagaagcaa
aggaatgatcttttcattgataaaaagcgacccaccaaaaaagatgaggttttggatgat
gtctctgatggccacagcgaagaagaagaagaagctggagacttattggatggagatgaa
caaatgtctgattttgatgatgatgatgtctctgaaatttcagatgaggatgatgctccc
ttggctgatgatttccttcaaggaagtgatgataatgaagacagtggttcaggttccact
tcaggttcgggttccgattctgattcagatgaaacagatatagaggagaagtccagggct
atcgatgaacaacgtgcgagggaagaaaaagatgcacaagctgagatggagctgaacatt
aaagaagagtctgatgagttcagactgccaacaaaagaggaacttgaagcagagcaacaa
cgtccgcccgatcttgcaaatcttcagatgagaataaaagagattgttcgagtgctctca
aattttaaggatatgaggcaagaaggaacgacaaggaaggattatattgaccaacttaaa
attgatttgggttcttactatggctacaatgaattcctgatcagggtcttggttgatatg
tttccggttgttgaactcatggaacttattgaagcttttgaaaagcctcgacctacatgt
atccggactaacactttaaggactcgcagaagggatctggccgacgttctttccaaaaga
ggagtagaactggaccaattaagcaagtggtcaaaagttggattggtggtttataattcg
catgtgcccattggtgccactccggagtatttggctggcttttactatatacaaagtgca
agctcctttttgcctgttatggctcttgctcctcaggagaaggaacgggtagttgatatg
gcagctgcacctggtggtaaaacgacttatgttgctgcgctcatgaaaaatagtggaata
atttatgcaaatgaaattagtgaagcaagactgaagtcacttactgcaaatttgcatcgc
atgggtgtaacaaacacaatagtttgtaattatgatgggagggagcttcccaaggttttg
ggtcagaattcagtcggtagagtgttgttggattctccttgtagtggtactggggttata
actaaagatccatcggttaagacctctaaaagtttggatgatatacaaaaatgtgcccat
ttgcagaagcaactgatacttgctgcaatcgatatggttgatgcaaattccaaatccggc
ggatacattgtttactcaacatgctcaataatggttccagagaatgaagcggtcatcgac
tatgcactcaagaagagagatgtcaaagtagtaccgtgtggacttgactttggatgtcct
ggatatatccggtttagggaacatcagtttcacacctccttagaaaacncaaggcggttt
tatcctcatgtccacaatatggatggattttttgtggccaagttgaagaaaatgagcaac
gcgaagaagaatcccataaattctgaagatctagaaaccattgtgcaaactcagagaccg
gagaatacccctatagataaggacaacacagaagagcttaaacaaaacttgaagaaacaa
ggcaataaacggaaaaaggagagcttaaagaagaatgttttatccaaaaatggaaaggta
gaatcacctccaacatcaaaaacgaagaaaagaactgaaactggaaaggtagagtcgcct
ttgtcatcaaaaaagaggaaaagaagatttccctcaaaagaagaaatatctgaagcaagg
gaaggtaaaagaaaggcaatgagggaaaaaaggaagcaaggaaggaaagagtaa
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