Gossypium hirsutum (upland cotton): 107893539
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Entry
107893539 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG4
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107893539
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107893539
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107893539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
zf-C3HC4
Prok-RING_4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
Sina_RING
zf-RING_5
vWA-TerF-like
zf-C3HC4_4
TerY_C
zf-Di19
Motif
Other DBs
NCBI-GeneID:
107893539
NCBI-ProteinID:
XP_040964888
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All DBs
Position
D13:complement(46344855..46349182)
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AA seq
413 aa
AA seq
DB search
MGNFLSKRKLKQMQIFEYLKKRTSMAAAPLQISTRGGESTAPINEPSGPQRKQSTKQKYG
FIPDHFSTFDQVTQALREAGLESSNLILGIDFTKSNEWTGKVSFNNRSLHAIGDTPNPYE
KAISIIGKTLAPFDEDNLIPCFGFGDATTHDTEVFNFHNDHSSCHGFEEVLACYRKIVPN
LRLAGPTSYAPVIDVAVDIVENSGGQFHVLVIIADGQVTRSVNTSDRELSPQEESTINSI
VNASLYPLSIVLVGVGDGPWDDMKKFDDKIPAREFDNFQFVNFTGIMSKNISPKEKETAF
ALAALMEIPLQYKAVIELDILGQRTGKAKKVVPRPPPVSYRRPTPAPPERIPSNVSSSSP
ADDQTQATCPICLTNTKDLAFNCGHTTCRECGSKVSNCPICRQRITNRLRLFT
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgggtaattttctttctaaacggaagctgaagcagatgcaaatttttgaatatttaaaa
aaaagaacatccatggccgccgcaccgctgcaaatttctactcgcggaggggaaagcact
gctccgattaatgaaccttccgggccacaaagaaagcaatctacaaagcagaagtatggg
tttattcctgatcatttctcaaccttcgatcaggttacccaggctttaagagaagctggt
ctagagtcgtctaatctcatactcggaatcgatttcacgaaaagcaatgaatggacaggc
aaagtatcattcaacaaccggagtctacatgcaattggtgatacaccaaatccgtatgag
aaagccatctccatcatcggaaagactctggctccatttgatgaagacaacttgatacct
tgtttcggctttggtgacgctaccacacatgatacggaagtgtttaacttccacaatgat
cattcatcttgccatggatttgaagaagtcttagcttgttacagaaagattgttccaaac
ttgagactagctggaccaacttcttacgcacctgtaatcgatgttgctgttgacattgtg
gaaaatagtggtggccaattccatgtcttagttatcattgcagatggccaggtcacacga
agtgttaatacaagtgacagagagctcagtccacaagaagaaagtacaatcaattcaatt
gtgaatgcaagcttatacccactgtcgattgttctggttggtgttggtgacggaccttgg
gatgatatgaagaaatttgatgataagattccggcacgcgagtttgacaacttccagttt
gttaatttcacagggattatgtccaaaaatataagtccaaaagagaaggaaactgctttt
gcgcttgctgcactcatggaaatccctttacagtacaaagcagtgatagaacttgacatt
cttggacaacgaactggaaaagccaagaaagtagttccacggcctcccccagtttcctac
cgtagacctacacctgctccacctgagcgtataccgagcaatgtctcatcatcatcacct
gcggatgatcagacccaggctacatgcccaatatgccttacgaatacaaaggacttggcc
tttaattgcgggcatacgacttgcagggaatgtgggtcaaaagtgtcgaattgtccaata
tgccgccaaaggattactaatcgtcttaggctgtttacttga
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