Gossypium hirsutum (upland cotton): 107893591
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Entry
107893591 CDS
T04793
Name
(RefSeq) piezo-type mechanosensitive ion channel homolog isoform X3
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107893591
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ghi04040
]
107893591
Membrane trafficking [BR:
ghi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
107893591
Ion channels [BR:
ghi04040
]
Other channels
Mechanosensitive channel (Piezo)
107893591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
DSPn
DZR_2
Piezo_TM25-28
Zn_ribbon_15
Motif
Other DBs
NCBI-GeneID:
107893591
NCBI-ProteinID:
XP_016674113
UniProt:
A0A1U8ICT6
LinkDB
All DBs
Position
A13:complement(75760715..75774471)
Genome browser
AA seq
2469 aa
AA seq
DB search
MGKFLIGFVLPQLLLTAALLNRSLISLVDLLTFLLIQYAAPEIGFQFPRQSLLSWYTLIF
SSLTILSHAIFYIVWVVKGDQWSISDAQWAKLIGFVRDQSSSFPSLIYFLMVQVLAALVA
LFEISGSRFGLDSQSDSFWGHLYSFVLQIGSHLRVLCCLLLPAVQLIVGISHPSWASLPF
FICSSIGLVDWSLTSNFLGLFRSWRYLLLYAGLNIVLLYIYQLPVEYYGIFKWLADFIGL
YKISAKSEWSEICSGLSLIVFYIILSWIRCDLMEMDFIMSARASSLTRQLLPSKHSFFIR
ESRSGVRHTNILLRGPILRTFGINYFTYGFPISLLALSFWSFHFASLYAFGLLAYVGYIL
YVFPSMYHLHRLNGLLLVLILLWAVSTYIFNIAFTVLSKEKWQDMEIWETIGLWHYPIPG
FYLLAQFSLGVLVALSNLVNNSVFLYLSDRDGPSSSDDSSLDDTEETKVLIVATIVYGLR
KSSRAMVLMLLFLIALNPGLIPALYMAFFLIFLLSHHVGTKIWQCLILLCEAHFTLLYLL
QLNLISSTLEKKGSIAEKILSQLGSFNHAKSGDFLKIAVLACFSAIHNHGFEMLLSFSAI
VQHTPCPPIGFTILRAGLLKSVILTVYTSKSRNPPEINFSHERKIGSYLNTIGKTFLSTY
RSCGTYIVFLTILLTVYVVTPNYSSFGYLFFLLMWITERQLVGKTVKRLWLPLKVYAIAV
FVFIYGLSAFSWLQEWLSRLVKLSSAFGYNPEASMLKNIWESLAVLVVMQLHRYERRQSK
NFAPRDDVPETDAFTFLKRLLIWHSEKILYLTIFYASLSPISAFGFSYLFGLVICAISSK
NSQIPSKLFLVYSASLVMIEYPFQMWGYQAEMFPGQKHHSVSFFLGLQVYEPGFLGVEFG
LRGKVLVIVACILQHSVSQWFEKMPSNFENEGWWEDSCGLFMSTEIASNGDMNFTRGRKC
LDANPLLRKMKKPRSYSCPSLKTIILGGMNPAGGSEGRNHTNGHLQESSNDNHKWKRKQI
HMLRKERLEMQKASLKVYIKFWVENMFNLFGLEINMIALLLASFSVLNAISLLYIASLAA
CILLHRDAINKLWLIFVFLFASIFTLEYMAFLLNLTSWMHLSPTRAKALCNDCWRSSHIH
FDYCKKCWLGFIVDEPRMLISYYTVFMFSCLKLHADRLSSLSGFQTYKEMMLHSKQVSGL
SDLSFETRVLWTFLDYLRLYSYCHLLDLVLALILITGTLEYDVLHLGYLGFALVFFRIRL
QILKKKNSIFKFLRIYNFALIVLSLAYQSPFVGDFCEGKCEMIDRISKVIGLHKYGFHVT
SRFALVEVIIFILVSLQSYMFSSLEFDYVSKYLEAEKISALVREQEKRAAWKTAHLQHIR
KSEEQKRMRNLQVEKIKSEMLNLLIQLHSLSTTNCGSTFPEGKIKRNRNLSVNSNPSQTT
PKKWDADLERNDLSGRLDLLSNHDMNGSPRSERTVVLCEEDSRQQSVNSLFEIDELHETV
NGNMYSHTKPQEKYQSKRSPLASAVQLIGDGVSQVQSLGSMAVMNLASLLNIEHEKLDSY
DHSSDDEVFYEVENHDFGGEHIERTHSMLSDSDRNMFNVARRQIKIIFHHIWDQMRSNNN
VVCYCCFILIFLWNFSLLSMVYLVGLFLYALCVNTGPSHMFWVIMLIYTEVCILLQYLYQ
IIIQHFGMIFKAGLFRELGFPACKNMSSFVISHWPLFLVYLFTLLQYAITASEGEWTVTA
EFSFTRKNHHQEIAAYDFGFFRRLKGLLLHLRNVMEVLIRNLYRYWISLTQESETPPYFV
QLSMEVNLPPGDGIQPEMIESKMNKLLKIMHDRRCRDNLNIYPASRVRVQSIERSPENDN
ISLVVFEVLYASPSGDSSFKEGQRSLTPSADVTSEILEAYHADIFREIRFPYTILSVIGG
GKKDIDLYAYVFCADLVVFFLVAIFYQSVIKNNSEFLEVYQHEDQFPKEFVFILMVIFFL
IVLDRVIYLCSFATAKVIFYLFTLFLFTYSVTNYAWQMEPSDKHAGKFALRAIYLTKLIS
LALQAIQIRFGIPNESNLYRQFLTSSISQTNFLGFRIYRALPFLYELRCVLDWSCTTTSL
TMYDWLKLEDIHGSLFLVKCDADLNRAKHQQGKKQTKLTKFCSGICLFFILICVIWAPML
MYSSGNLTNIANPIREASVQIDIKTSSGRLTLFETTLCERISWNKVKHEHIDLDPQGYLD
NYNEVDIQLICCQPDASKVWLVPPVVQARFIDSLQQSMDIVFSWQFRRDRPKGKEVVKHQ
LLVADHDLPKSAEVMQVLNGTANSFRMFNIYPRYFRVTGSGDLRFLEQLVEKVSGDLVLN
HGNPEWWSFQDIDASSGTGCCEFAGPVAIIVSEETPQGILGDTLSKFSIWGLYITFVLAV
GRFIRLQCSDLRMRIQVENLPSCDRLLAICEDIYAARAEGELEVEEVLYWTLVSIYRSPH
MLLEYTKPD
NT seq
7410 nt
NT seq
+upstream
nt +downstream
nt
atggggaagttcctcattggatttgtattgcctcagcttcttttgacagctgctttgctg
aatcggagtttgatatctctggttgatctgttaacctttctcctcattcaatatgcagct
ccagaaataggttttcagttcccaaggcaatctctcttatcatggtacacacttatcttt
tcgtcactaactattctgtcacatgccatattttacattgtttgggttgtgaaaggagac
cagtggagcatttctgatgctcaatgggcaaagctaatcggttttgtaagagatcagtct
tcgagctttccatctttaatatatttcttgatggtacaagtactagcagctttagttgcg
ttatttgaaataagcggcagtagatttggcttggattcacagagtgattcattttggggg
catttatattcctttgtactacaaataggttcccatctaagggttttatgctgcttattg
ttgcctgctgtacaacttattgttggaattagtcatccctcttgggcatctttaccattt
tttatttgtagtagtattggacttgttgattggtctttaacaagcaactttcttggcctt
ttcagatcttggcggtaccttttgttgtatgctggcttgaacattgtcttactctacata
taccaactccctgtcgagtattatgggatctttaagtggctagctgattttattggactc
tataagatatctgctaaatcggagtggtcagaaatttgttctggtctttcgcttatagtc
ttttacatcattctatcttggattagatgtgatcttatggaaatggatttcatcatgtcg
gcaagagcaagcagcttgactaggcaacttcttccttcaaagcattcattctttattcgt
gaatcaagatccggtgttaggcacactaatattttgttaagaggaccaatcttacggact
ttcggcattaactattttacttatggttttccgatttccttgcttgctctttccttttgg
agtttccactttgcgagtctctatgcatttggacttcttgcgtatgttggctatattctg
tatgtcttcccctcaatgtatcacttgcatcgattgaatggcttgctacttgttttgatt
ctcttgtgggctgttagcacatacatcttcaacatagctttcacagtccttagtaaggag
aaatggcaggacatggagatttgggaaacaattgggctatggcactaccctatccccgga
ttttatctattggcacaatttagccttggggttcttgttgcattgagtaatcttgttaac
aattccgttttcctgtacttgtctgacagagatgggccatcttctagtgatgattcctct
ttagatgacacagaggaaacaaaagtactgattgtagctaccatagtatacggactgcgc
aaaagttctcgggctatggtgctgatgctgttgttccttattgcgttaaaccctggcctc
atccctgccttatacatggcttttttcttgatatttctattaagccaccatgtaggtaca
aaaatatggcaatgcttaattctgttatgcgaggcacatttcacactgttatatcttctt
cagcttaatcttatatcttctaccttggagaaaaaaggctcgattgctgagaaaattctt
tcacaactaggttcgtttaatcatgctaagtctggggacttcctgaagatagctgtgctt
gcttgcttttctgccattcataatcatgggtttgaaatgttgctctcattttcagcaatt
gttcaacacactccttgccctccgatagggtttaccatcttgagagctggtttgctcaag
tctgttatattgacggtttatacctcaaaatcaagaaacccccctgaaattaacttctct
catgagagaaaaataggatcatatttgaatactattggcaagacgtttctttcgacatac
cgatcatgtggaacttacattgtctttctcacgatccttcttacagtttatgtagtaacg
cctaactattcttcatttggttacctattcttccttctaatgtggattaccgaaagacaa
ctcgtagggaagacagtaaagcgcctttggctaccgctgaaagtttatgccattgcagtg
tttgtgttcatttacgggttaagtgcgttctcttggcttcaggaatggttgtccagatta
gttaaactttcttctgccttcgggtataacccagaagcttcaatgttgaaaaacatttgg
gagtccttagctgtattagttgtgatgcaactacatcgttacgagaggaggcaaagcaaa
aacttcgcaccgagggatgatgtgccagaaactgatgcttttacttttctcaagcgcctt
ctaatttggcacagtgaaaagatactgtatcttaccatattttatgcatctttgtcaccg
atcagtgcatttgggttttcctatcttttcggtttagttatttgtgccatttcatcgaaa
aactctcagatcccttcaaaactctttctggtttattcggcatcacttgtgatgattgaa
taccctttccagatgtggggttaccaggctgagatgttccctggtcagaaacaccattcg
gtttcattttttctcggcttgcaggtgtatgaacccggtttcttaggtgtagaatttggc
ttgagagggaaggtgctagttattgttgcgtgcattctgcagcacagtgtctctcagtgg
tttgaaaagatgccgagcaactttgaaaatgaaggatggtgggaggactcttgtggtttg
tttatgtcaactgaaatagcctcaaatggtgacatgaattttaccagaggaagaaaatgt
ttagatgccaatccgctgttaagaaaaatgaaaaagccaagaagctattcgtgcccatct
cttaagactatcattttaggaggtatgaatcctgcaggaggcagtgaaggtagaaaccat
acgaatgggcatttgcaggaaagttccaacgataatcataaatggaagagaaagcaaatt
catatgttgagaaaggagaggctggaaatgcaaaaggctagtctgaaagtttatatcaag
ttctgggtagagaatatgtttaatctcttcggcctcgagataaacatgatcgcattgctt
cttgccagcttttctgtgctgaatgctatatctttgctctacattgcatctcttgcagct
tgcattcttttacatcgggacgccataaataaactgtggctaatatttgttttcttgttt
gcttccattttcaccctcgagtacatggcttttttgttgaatctgacttcctggatgcat
ctttccccaactagggccaaagcgctttgcaatgactgctggagaagctcccatattcat
tttgattactgcaagaaatgctggctaggtttcatagtagatgaacccagaatgcttatc
agctattacacagttttcatgttttcatgtctcaaacttcatgcggatcgcttgtcgagt
ctctcagggtttcagacatataaagaaatgatgcttcactcaaaacaagtatccggtctg
agtgatctctcgtttgaaacaagagtcttgtggacatttcttgactacctaaggctttac
agttattgtcacttactggatcttgtgcttgctttaattttgatcactggaacactagag
tatgatgttcttcaccttggataccttggatttgctctagttttcttccggattaggctt
caaattctaaagaaaaagaatagcatcttcaaattcttgcggatttacaattttgctctg
attgtccttagtcttgcataccagtctccttttgtaggtgatttttgtgaggggaaatgt
gagatgatagatcggattagcaaagtgatcgggttgcataaatacggatttcatgttaca
tctagatttgcacttgttgaggttataatattcattctggtttcacttcagtcatacatg
ttttcatccttggaatttgactatgtatcgaaatatcttgaagcggaaaagatcagtgct
ttagtccgtgagcaggagaagagggctgcatggaagactgcacatttgcaacatatacgt
aaatccgaggagcaaaagcgcatgcgtaatctacaagttgaaaagatcaaatcagagatg
ctcaacttgctgatccaacttcatagcttgagcaccactaattgcggtagcacctttcct
gaaggcaaaatcaaaagaaacaggaacctttcggtaaattcaaatccatctcagactacc
cccaaaaaatgggatgctgatttagagagaaatgatcttagtggaagattggatttgtta
tctaatcatgatatgaatggatctcctagaagtgaaagaactgtagttctttgtgaagag
gactccagacagcagtcagtcaattcactgttcgagattgatgaactacacgagacagtt
aatgggaacatgtattcccatacaaagcctcaagaaaaataccaatccaagagaagtcca
ctagcatcagcagtacaactgataggtgatggagtttcacaggtgcagtctctcggtagt
atggcagtcatgaatctcgcaagcctcttaaacattgaacatgaaaaactggattcatac
gatcattcttcagatgatgaggtattttacgaggtagagaatcatgattttggtggtgaa
catattgaacgaacgcattcaatgctatctgatagtgataggaacatgtttaatgttgcg
cgccgacaaatcaagatcatcttccaccatatttgggaccaaatgagatcaaataacaat
gttgtttgctactgttgctttattctgattttcctatggaattttagcctgctttccatg
gtttatctagttggtctcttcttgtatgctctatgtgtaaataccggtccgagccacatg
ttctgggttattatgctaatttacactgaggtctgtattttgcttcaatacttatatcaa
atcatcattcaacattttgggatgattttcaaagccggattgtttcgggagttgggattt
ccggcgtgcaagaacatgtcatcttttgtgatcagccattggcctctttttttagtgtat
ttgtttactctcttacagtatgccataactgccagcgaaggcgaatggactgtgacagcc
gagttcagctttactagaaaaaatcaccaccaggaaattgctgcatatgattttggattc
tttaggagattaaagggactgcttttacatttaagaaacgtgatggaagtgttgattcga
aatctttacaggtactggatatccttaacacaggaatctgaaactcctccttactttgtg
cagctatctatggaagtcaacttaccaccaggggatggcattcaacctgagatgattgaa
tcgaaaatgaacaagttgctgaagatcatgcatgacagaagatgcagagacaacctcaac
atttatcctgcaagtagagttcgagttcaaagcattgagcgaagtccagaaaatgataac
atttccctggttgtttttgaggtgttatatgcctccccttcaggagattcttccttcaaa
gaagggcaaaggtcgttaaccccgtctgctgatgtaactagtgagattctagaagcctac
catgccgatatttttagagaaatacggttcccttacactatactttctgtaatcggtgga
ggtaagaaagatatagatctatacgcctatgtattttgtgcagatctagttgtcttcttc
ttggtggcaattttctaccaatctgtcataaaaaataacagtgagttccttgaagtttat
cagcatgaagatcaattcccaaaagagttcgtgtttatcttaatggttatctttttcttg
atagtgctggatcgcgtcatttacctttgttcatttgccactgcgaaagttatattctat
cttttcactcttttcctcttcacatactctgtcacgaactatgcttggcaaatggagcct
tcggacaaacatgccggaaagtttgcgcttcgtgctatttacctcacgaagctgatttcc
ctggctctgcaggccatacaaatccgatttgggattccaaatgaaagcaatctgtacagg
caattcttaacaagtagcatttctcaaactaatttcttgggtttccgaatttatcgtgct
ctccctttcctttatgaacttcgatgtgttcttgattggtcttgcacaactacatcttta
accatgtatgattggttgaagttggaagatatccatggaagcttgtttcttgtcaaatgt
gatgcggatctaaatagagctaaacaccagcaaggaaaaaagcagacaaagctaactaaa
ttttgcagtggcatttgcttattcttcatactgatttgtgtcatatgggcccctatgctg
atgtacagcagtggtaacctgacaaatattgcaaaccccataagagaagccagtgtgcag
attgatataaagacgagcagcggaaggcttacattgtttgagaccactttgtgcgaaagg
atctcatggaacaaagtaaaacacgaacatatcgatcttgatccacaaggctacttagac
aattataatgaagtggacattcaactgatatgttgccaacctgatgcaagcaaagtatgg
cttgttcccccagtggtccaagcccgatttatcgattctctccaacagagcatggacata
gttttctcttggcaattcaggagagatagaccgaaagggaaggaagttgtgaaacatcaa
ttacttgttgctgatcatgatcttcctaaatctgcagaagtgatgcaagttcttaatggt
actgctaatagtttcagaatgtttaacatctatccaagatatttccgggttactggttct
ggagatttgcggtttctcgaacagttggttgaaaaggttagtggggatcttgttctcaat
catggaaatccagaatggtggtcttttcaggatattgatgcatcaagtggaactggatgc
tgtgagtttgctggaccagtggccataattgtatccgaggaaacaccgcagggcattctt
ggggatacattgagcaaatttagcatttggggtctttacattacttttgtgctagctgtt
ggccgtttcatcagactacaatgttctgatctcagaatgagaatacaagttgagaacctt
ccttcttgtgacaggttgcttgcaatctgtgaggacatatatgctgcaagagctgagggt
gagcttgaggttgaagaggttctttactggacactggtcagcatttatcgatctccacac
atgctgctcgagtacactaagcctgactaa
DBGET
integrated database retrieval system
