Gossypium hirsutum (upland cotton): 107893659
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Entry
107893659 CDS
T04793
Name
(RefSeq) WD repeat-containing protein 76
KO
K24755
WD repeat-containing protein 76
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107893659
03036 Chromosome and associated proteins [BR:
ghi03036
]
107893659
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107893659
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107893659
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107893659
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
107893659
DSBR (double strand breaks repair)
Other DSBR factors
Others
107893659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
WD40_WDHD1_1st
WD40
Beta-prop_EIPR1
EIF3I
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
107893659
NCBI-ProteinID:
XP_016674203
UniProt:
A0A1U8ID21
LinkDB
All DBs
Position
A06:35885997..35889815
Genome browser
AA seq
525 aa
AA seq
DB search
MASQKLTEYERQRLENIKRNAEMVAALKLHSKAATLSAATAKRHRTKTYKTSPEKKPKTE
TPIVIRRSLRTRGMPPDSKGLPDDFSDNFDKTPKSVSVIKPQSPRVLGPISMVDAFSGDD
ETESNKMLVGTILSIAKETQVGVSVKDVKDEIFSEKGALGSCKSEGFESLGTEKVDESLS
GKRKLVKGVVKNEYLDSLVKIEKSDQWLESLDLKPENVARLLPGRIMVVKFSPCSSVRMI
AAGNKFGNIAFWNVDSNNEKEDGIYLYRPHTGPISGILIHQHSMSKIYSSCYDGFIRLMD
AEKEVFDLVHSCDDTIFSLSQQPNNSETLYFAEGRGGLKVWDIRTGKSSKNWMLHEDRIN
TINFNSQNPNIMATSSTDGTACIWDLRSMSGHKLKTLKTVSHSRAVHSAYFSPSGSSLAT
TSLDNKVGIISGVNFEDACMIYHDNWTGRWLSSFRGIWGWDDSYIFIGNMKRGVDVISPS
QKRSVMTLQSPEMSAIPCRFDAHPYEIGMLAGATSGGQVYLWTPC
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcagaaactaacagagtatgaacgtcaaaggctcgaaaacataaagagaaac
gccgaaatggtggccgcactcaagctccactcaaaagcagccactctttcagccgccacc
gccaaacgccacaggacgaaaacgtataaaacgagtccagagaaaaaacccaagacggaa
acccctatcgtaattcgacggtcgttgaggacgagaggtatgccgccggattcaaaaggt
ttgcctgatgacttttctgacaatttcgataaaaccccaaaatccgttagcgttataaag
ccgcaatcgcctcgtgttttgggtcctattagtatggtagatgcttttagtggagatgat
gaaacggagtctaacaaaatgctggttgggacaattttgagtattgcaaaggagacccaa
gttggtgtttcggttaaggatgttaaagatgagatttttagtgagaaaggtgctttgggt
tcttgcaaaagtgagggttttgaatcactaggtacagaaaaggttgatgagagtttgagt
ggaaaaaggaagttggtcaagggtgtggttaaaaatgagtatttggatagtttagttaag
attgagaagagtgatcaatggctggaatcgttggatttgaaaccggaaaatgtagcacgg
cttttgcctggaaggattatggtggttaagttttccccttgcagtagtgtgaggatgatt
gcagctgggaacaaatttgggaatattgcattttggaatgtggattctaacaatgaaaag
gaagatggcatatatctttatcgcccgcatactggccccatttctgggattttgattcat
caacattcgatgtcaaagatttatagcagctgctatgatggctttattcgattaatggat
gctgagaaggaagtttttgatctggtgcattcttgtgatgataccatattttccctctct
caacagcctaataattcggagaccttatatttcgctgagggtcgtggaggattgaaggtt
tgggatattcggactgggaagtccagtaaaaactggatgcttcatgaagataggatcaac
accataaacttcaactcacaaaatcccaacataatggcaaccagttcaacggatggaact
gcttgcatttgggatttaaggagtatgagcggccataaactgaaaaccttaaagactgtg
agccatagtagggctgttcattccgcttacttctctccctctggaagctctcttgcgacc
acaagtttggacaacaaggtgggtataataagtggagttaattttgaggacgcttgtatg
atataccatgataattggactgggaggtggctttccagtttcagaggtatatgggggtgg
gatgattcatacatcttcattggcaacatgaaaagaggtgttgatgtaatctctccatca
caaaagagaagtgttatgactttgcagagtccagaaatgtctgcaattccatgcagattt
gatgcgcacccatatgaaattgggatgttagcaggagccaccagtgggggtcaagtttat
ctatggacaccatgttaa
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