Gossypium hirsutum (upland cotton): 107893708
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Entry
107893708 CDS
T04793
Name
(RefSeq) WD repeat-containing protein LWD1-like
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107893708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107893708
03036 Chromosome and associated proteins [BR:
ghi03036
]
107893708
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107893708
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
107893708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_Aladin
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR41
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
107893708
NCBI-ProteinID:
XP_016674255
UniProt:
A0A1U8I7P2
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All DBs
Position
A03:50913043..50914208
Genome browser
AA seq
346 aa
AA seq
DB search
MTATSDPNPEVSDEQQKRSEIYTYEAPWYIYAMNWSVRRDKKYRLAIASLLEQYPNRLQI
VQLDDSNGEIRSDPNLSFDHPYPATKTIFIPDKDCQKPDLLATSSDFLRIWRISDDGSRV
DLKSLLNGNKNSEFCGPLTSFDWNEAEPKRIGTSSIDTTCTIWDIEKETVDTQLIAHDKE
VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDAPLVRLGWNKQDPRYMAT
IIMDSAKVVVLDIRFPTLPVVELRRHQASVNAVAWAPHSSCHICTAGDDSQALIWDLSSM
GQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccagcgatccgaaccccgaagtttccgacgagcagcaaaaacgatcggag
atatacacatatgaagctccctggtacatctacgctatgaattggagcgtccgccgcgac
aaaaagtaccgactcgccatcgccagcctcctcgagcaataccctaaccgtctccagatt
gttcaactcgacgactccaatggcgaaatccggtcggatcccaacctctccttcgaccat
ccctatcccgctactaagaccatcttcattcccgacaaggattgccagaaacccgatctt
ctcgctacctcctccgattttctccgcatatggcggatctcggatgacggttcccgcgtt
gacctcaaatcgctccttaatggcaataagaacagtgaattttgcgggcctcttacgtct
ttcgactggaacgaggcggagccgaagcgaatcgggacttcctccattgatacgacttgc
actatttgggatatcgagaaggaaacagtggatacccagttaattgcccacgataaggag
gtttacgacatcgcttggggcggagttggggttttcgcttccgtctcagccgacggttcc
gttagggttttcgatttacgcgacaaggaacattcgacgatcatctacgagagttcggag
ccggacgcgccgctggtgcggttggggtggaacaagcaggaccccagatatatggcgacc
attataatggatagtgccaaggtggttgttttggatatccgtttcccgacgttgccggtg
gttgagttgcggagacaccaggcgagcgtcaatgccgtcgcttgggctccccatagttcc
tgccacatttgcactgccggcgatgattctcaggcgttgatttgggatttgtcttcgatg
ggtcagcctgttgaaggtgggcttgaccctattcttgcatacacagctggggccgaaatt
gaacagttgcaatggtcgtcgtctcagcctgattgggtggccattgccttctccactaag
cttcagattctaagggtatga
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