Gossypium hirsutum (upland cotton): 107893827 Help Entry 107893827         CDS       T04793                                  Name (RefSeq) protein PIR isoform X1   KO K05749   cytoplasmic FMR1 interacting protein Organism ghi  Gossypium hirsutum (upland cotton) Brite KEGG Orthology (KO) [BR:ghi00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ghi03019]     107893827 Messenger RNA biogenesis [BR:ghi03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      107893827    Factors involved in mRNA localization     Other mRNA localization factors      107893827 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  FragX_IP CYRIA-B_Rac1-bd Motif Other DBs NCBI-GeneID:  107893827 NCBI-ProteinID:  XP_016674421 UniProt:  A0A1U8I887 LinkDB All DBs Position A13:complement(69831715..69852550) Genome browser AA seq 1286 aa AA seqDB search MAAVPVEEAIAALSTFSLEDEQPEVQGPAVLVSTERGSTISPIEYSDVSAYRLSLTEDTK ALNQLNTLIQDGKEMASVLYTYRSCVKALPQLPESMKHSQADLYLETYQVLDLEMSRLRE IQRWQASAATKLAADMQRFSRPERRINGPTITHLWSMLKLLDVLVQLDHLKNAKASIPND FSWYKRTFTQVSIQWPDTDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLI VFAVESLELDFALLFPERHMLLRVLPVLVVMATSSEKDSESLYKRVKINRLINIFKNDPV IPAFPDLHLSPTAILKELSNYFQKFSSQTRLLTLPSPHELPPREAQDYQRHYLIVNHIGA IRAEHDDFSIRFASAMNQLLLLKSTDGADVEWCKEVKGNMYDMVVEGFQLLSRWTARVWE QCAWKFSRPCKDVGPSESQELSSSYSDYEKVVRYNYSAEERKALVELVSYIKSVGSMMQR SDTLIADALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTNKP DSEFQSLQHGGDESRGNFFYPRPVAPTTAQVHCLQFLIYEVVSGGNLRKPGGLFGNSGSE IPVNDLKQLETFFYKLSFFLHILDYSATIATLTDLGFLWFREFYLESSRVIQFPIECSLP WMLVDHVLESQSAGLLESVLMPFDIYNDSAQHALVVLKQRFLYDEIEAEVDHCFDIFVTK LCEAIFTYYKSWSASELLDPSFLFALDNGEKYSIQPMRFTSLLKMTRVKLLGRTIDLRSL IAERMNKVFRENLEFLFDRFESQDLCAIVELEKLIDILKHSHELLSKDLSIDSFSLMLNE MQENISLVSFSSRLASQIWSEMQSDFLPNFILCNTTQRFVRSSKVPLVPVQKPSVPHAKP NFYCGTQDLNSAHQSFARLHSGFFGIPHMISLVKLLGSRSLPWLIRALLDHISNKIATLE PMITGLQETLPKSIGLLPFDGGVTGCMRLVKEQLSWGTKSELKAEVLRGIKEIGSVLYWM GLLDIVLRELDTTHFMQTAPWLGLLPGADGQMLSQNAGESPVVNLFKSATAATVSNPRCR NPASFYTMSKQAEAADLLYKANLNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITT SKDFYRIYSGLQIGYLEQSVQLQPNNHDMLGDSVAWGGCTIIYLLGQQLHFELFDFSYQI LNVAEVEAASIMQTHKSPHSGQGWDSMLEAMKKARRLNNHVFSMLKARCPLEDKMACAIK QSGAPLPRIKFENTVSAFETLPQKGT NT seq 3861 nt NT seq  +upstreamnt  +downstreamnt atggcagcagttccagttgaagaagccattgcagctttatccacattctccctagaggat gagcaaccagaagtacaaggaccagcagttttggtctcaactgaaagaggatcaactatc agtccaattgagtatagtgatgtttctgcttaccgtttgtctcttacagaggacacaaaa gctctcaatcagcttaacacacttatccaggatgggaaggagatggcatcagtgctttat acatatcgcagctgtgtcaaagcacttcctcagcttcctgaatctatgaagcatagtcaa gctgacttatatctagaaacatatcaagttctggacttggagatgagtcggttgcgtgaa atacagcgatggcaagcatcagctgcgactaaacttgctgctgatatgcaacgcttttct aggcctgagcgacgaattaatggccctacaataactcacctctggtccatgttaaagtta cttgatgttttggtgcaacttgatcatctcaaaaatgctaaagcaagcatacctaatgat ttctcttggtacaagaggacattcacacaagtcagcattcagtggccagatactgattct atgagggaggaattggatgatttacagatttttttaagcacaaggtgggctattttattg aacttgcacgtggagatgttccgtgtgaacaatgtagaggatatccttcaggttcttata gtctttgctgttgagtcattggaactggattttgctcttctgtttcctgagcgacacatg cttctgcgagtgttgcctgttcttgttgtcatggcaacatcatcagagaaagatagtgaa tcactgtataagagggtgaaaataaatagactgatcaatatatttaagaatgatccagta attcctgcattcccagatcttcatctttcgccaactgcaattttgaaagaattgtcaaat tacttccaaaaattttccagccaaactcgtcttctcactcttccatcacctcatgaactc ccaccccgagaagcacaagattatcagaggcattatctgattgtcaatcacattggagcc atccgtgctgagcatgatgatttttctatccgttttgcctcagcaatgaatcagcttttg ctgctgaaatctactgatggtgctgatgttgagtggtgcaaagaagttaaaggaaacatg tatgatatggttgttgaaggtttccagctattgagtagatggactgcacgtgtttgggaa caatgtgcatggaaattttctcgcccatgcaaagatgtcggtccttcagaatcacaagag ttatcatcatcttattctgattatgagaaggttgtacgatataattatagtgcagaggaa aggaaagcacttgttgaacttgttagctacataaagagtgtcggatcaatgatgcagcga tctgatacattgatagctgatgctttgtgggaaacaatacatgcagaagtccaagatttt gttcaaaatacattagctaccatgttgcgaactacatttagaaagaaaaaggatctgtca aggattctctccgatatgcggaccctttcagcagactggatggcaaacacaaacaagcct gactccgagtttcagtctttacaacatggaggtgatgaaagtagagggaacttcttttat ccaaggccagtggcacctacaacagctcaggttcattgcttgcagtttctcatatatgag gtcgtctctggtggtaatctaaggaagcctgggggcctctttggtaacagtgggtctgag attcctgttaatgacttgaagcagttggaaacattcttttacaagctaagcttcttcttg cacatattggattattcagcaactattgcaacactgacagatcttggtttcttgtggttt agagaattttacctggagtcttctcgtgtcattcaatttccaatagagtgctcccttcct tggatgctggtggatcatgtgcttgagtcccaaagtgctggtcttcttgaaagtgtgttg atgccttttgacatatataatgattcagcacagcatgcactggttgtgctgaagcagcgc ttcctttatgatgaaattgaggctgaggtggaccattgtttcgatatatttgttacaaaa ttatgtgaagctattttcacatattacaagagctggtctgctagtgaactgcttgatcct tcattcctctttgccttggataatggagaaaagtattctatccagcctatgcggtttact tcacttctaaagatgactagagtgaagttacttgggaggactattgatttaagaagtctg attgctgaacggatgaacaaagtcttcagagaaaatcttgagtttctttttgatcgtttt gagtctcaggatctatgcgccatagtggaattagaaaagctgatagacatattaaagcat tcccatgaattgctttcaaaggatctttcaatagactccttcagtctcatgttgaatgag atgcaggagaacatttctcttgtgtcattttctagtcgactagcttctcagatttggtct gagatgcaaagtgatttcctgccaaactttatcctttgcaatactactcagcgattcgtt cgatcttcaaaagttcctcttgttcctgttcaaaagccatcagttccacatgccaagcca aacttctactgtggtactcaagatttaaattctgcacatcaaagctttgcgcgtttgcat agtggcttttttgggattccacacatgatttctcttgttaaacttctaggatcaaggtcc ttgccatggcttatccgagcactactagatcatatatcaaacaagattgctacacttgag cctatgatcacaggcttgcaagaaacactgcctaaatctattggacttcttccttttgat gggggtgtgacaggatgtatgaggcttgttaaagagcaactcagctggggaacaaaatca gagctcaaggcagaagtccttcgcggaataaaagagattggaagtgtattatattggatg gggctccttgatattgttttgagagagctggataccacacatttcatgcaaacagcacct tggttgggcttgcttcctggtgcagatgggcaaatgctttcacaaaatgctggagagagt cctgttgtcaacctcttcaaatctgctacagctgcaactgtgtcaaaccctaggtgccga aatccagcctctttttacacaatgtcaaagcaggcagaagctgcagatcttctgtacaag gctaacttaaatactggaagtgtattagaatacgcccttgcatttacaagtgcagcctta gataaatattgcagtaaatggagtgctgccccgaagactgggttcattgacatcacaacc tcaaaggatttctatcgtatatatagtggcctccaaattggatatctagaacagtctgtt caattacagcctaacaatcatgatatgctgggggattcagttgcttggggaggctgtacc attatatacttgctcggccaacagctgcattttgagctgtttgatttttcataccaaatc ctaaatgttgcggaagttgaagctgcatcaatcatgcaaacgcataaaagtcctcattct ggccagggatgggatagcatgttagaagcaatgaagaaagcaaggaggttgaacaatcac gttttttcgatgctgaaagcacgatgccctctggaggacaaaatggcttgtgctataaag caaagtggtgctcctttgcctcggattaagtttgaaaatactgtttctgcattcgaaaca ctgccgcagaaaggtacctga

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