KEGG   Gossypium hirsutum (upland cotton): 107893919
Entry
107893919         CDS       T04793                                 
Name
(RefSeq) protein transport protein SEC31 homolog B-like isoform X1
  KO
K14005  protein transport protein SEC31
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107893919
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107893919
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ghi02044]
    107893919
Membrane trafficking [BR:ghi04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    107893919
Secretion system [BR:ghi02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   107893919
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 WD40 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd TPR_GEMI5 Beta-prop_TEP1_2nd MIOS_WD40 SRA1 WDR55 TPR_Sec16 Beta-prop_WDR35_TULP_N Prp18
Other DBs
NCBI-GeneID: 107893919
NCBI-ProteinID: XP_040938683
LinkDB
Position
A12:complement(78661748..78674613)
AA seq 918 aa
MVQGSGSAVQGEISFLSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFADSVRRRSSVL
QWHPDVATQLIVASDEDGSPALRLWDMRNIMSPVKEFVGHTKGVIAMAWCPSDSSYLLTC
AKDNRTICWDTVTGEIVCELPAGMNWNFDVHWYPKIPGVISASSFDGKIGMYKIEGCCIY
GVGEGDFGAVSLRAPKWYKRPVGASFGFGGKMVSFCPRASGVGTSASSEVFVHYLVTEES
LVSRSSEFESAIQNGERSSLRVLCEKKSQESESQDDRETWGFLKVMFEDDGTARTKLLMH
LGFSLPAEEKDTVQDDLSRSLNDITLEDKVAEKVGHEVEKEATLFAADNGEDFFNNLPSP
KTDTPVSPSGDNFAIESGVPREELIPQESDGLEESVDQSFNDAVQRALVVGDYKGAVAQC
IAANKMSDALVIVHVGGASLWESTCDQYLKISHSPYLKFAQREEWTVLCDSLASKLIASG
NTLAATLCYICAGSIDKTVEIWSRCLTTEHDGKSYIDLLQDMMEKTIVLALATGHKQFSA
SLCKLVEKYAEILASQGLLMVAMEYLKLLGSYELSPELEILKDCIALSMEPEKETKSASF
GNSHPTSGPVFDPSQHLYPESATSQIQPNVPTTYDESYQCSFPSYGGYAPPASYQAPANI
FVPTPAPPHASQANFAPSTGTTQPAVRPFIPSNPPVLRNADQYQQPSTLASQLYPGSANP
TYPAPLASGSLASVPSQMESVPGPKMPQVVASPPASTGFMPVTNTSVVQRPGMSPMQPSS
STQPALLQPAAAPAAAPPTMQTVDTSNVPAHQKPVITTLTRLFNETSQALGGLRANPAKK
REMEDNSRKIGALFAKLNSGDISKNASDKLIQLCQALDNDDFDTAVQIQVLLTTSEWDEC
NFWLAILKRMIKTRQNVR
NT seq 2757 nt   +upstreamnt  +downstreamnt
atggtgcagggtagcggttctgctgttcaaggtgaaatttcatttctctcttggaatagc
aaggttcaacatatattggcatcaacttcatataatggaacgactgttgtttgggacttg
aagaagcaaaaaccagtgataagctttgcagattcagttagaagaagaagttctgttttg
cagtggcatcctgatgttgccactcaacttattgttgcatctgatgaagatggttcccct
gcacttaggctttgggacatgcggaacataatgtcaccagtgaaggagtttgtagggcac
acaaaaggtgtaattgcaatggcatggtgtccctctgatagctcttatttgctcacatgt
gccaaagataataggactatttgttgggatacagttactggagagattgtctgtgaactg
cctgctggtatgaactggaactttgatgttcactggtatccaaagatacctggagtgata
tcagcatcttcctttgatggcaagattggaatgtacaaaattgagggttgctgcatatat
ggtgttggggagggtgattttggtgcagtgtctttgagagctccaaaatggtataaacgt
cctgttggggcttcttttggttttggaggaaaaatggtctctttttgccctcgggcatct
ggtgtaggtacttctgcatcatcagaggttttcgtgcattacttagttaccgaagaaagc
ctggtcagccgttcatctgaatttgaatctgcgatacagaatggggagaggtcttcacta
agggttttatgcgaaaagaaatctcaagagtctgaatctcaggatgatcgtgaaacatgg
ggcttcttgaaggtgatgtttgaagatgatggaacagctaggacaaagttgcttatgcat
cttggctttagtctacctgcagaagaaaaagatactgtacaagatgacctctcgcggagt
ctgaatgatattacacttgaggataaagttgcagaaaaagtaggccatgaagttgagaaa
gaagctactctctttgcagctgataatggagaagatttcttcaataatcttccaagtccc
aaaactgatacgcctgtttctccatctggtgataattttgccattgagagtggagttcct
agggaagagttaatacctcaagaatcagatggactggaggaaagtgtagatcaatcattt
aatgatgctgttcaacgcgctttggtggtgggtgactataaaggggctgttgctcagtgc
attgcagcaaataaaatgtctgatgctttagttattgttcatgttggtggtgcttcatta
tgggagagcacatgtgaccagtatctaaagattagccattcaccatacctgaagtttgcc
cagagagaggagtggacagtactttgtgattcgcttgcttcaaaactaattgcctctggt
aatactctggcagcaactctttgttatatatgcgctggaagcattgataaaacagtagag
atttggtcaaggtgcctgacgactgaacatgatgggaaatcttacattgatcttctccag
gatatgatggaaaagaccattgtcttggctttggcaactggacataaacaatttagtgca
tctctatgcaagcttgttgagaaatatgctgaaattttggctagtcaggggcttctaatg
gtagcaatggagtacctgaaactcttggggtcttatgagctgtcacccgaactcgagatc
ttaaaagattgtatagcactctctatggaacctgagaaagaaactaaatctgctagtttt
ggtaattctcatccaacaagtggaccagtctttgacccttcgcaacatttatatccggag
tcagccacatcgcaaattcagccaaatgttcctactacttatgacgaaagttatcagtgt
tcttttccatcatatggaggatatgctcctcctgcctcgtatcaagctcctgccaatatc
tttgttccaacccctgctcctcctcatgcatcccaggcaaatttcgctccttcaactggc
accactcagcctgctgttagaccgtttattccttctaatcctcctgttctacgaaatgca
gatcaataccagcagccaagtaccttggcttctcagttatatcctggtagtgccaaccct
acttatcctgcaccccttgcttctggttcacttgcatctgtcccatcacaaatggaatca
gttcctggccccaaaatgccccaagttgttgcttcccccccagcatctacaggatttatg
ccagtaactaatacatctgttgttcaaagacctgggatgagcccaatgcaaccatccagt
tctacacagccagcattactacaaccagctgcagcacctgctgctgctccaccaaccatg
cagactgttgatacgtcaaatgtccctgcacaccagaaacctgtaatcacaaccttaacc
agacttttcaatgaaacatctcaagcactgggaggcttacgagcaaacccagctaagaag
cgtgaaatggaagacaattcaagaaaaatcggcgccttgtttgccaaactcaacagtgga
gacatttcaaaaaatgcttccgataagcttattcaactctgccaggctttggacaatgat
gattttgatacagctgtacaaatccaggttcttcttactactagtgagtgggatgagtgc
aacttttggcttgcaatcctaaagcggatgattaagacaaggcagaatgtaaggtaa

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