Gossypium hirsutum (upland cotton): 107893942
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Entry
107893942 CDS
T04793
Name
(RefSeq) transcription factor CSA
KO
K09422
transcription factor MYB, plant
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107893942
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
107893942
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
DUF6581
Motif
Other DBs
NCBI-GeneID:
107893942
NCBI-ProteinID:
XP_016674587
UniProt:
A0A1U8I901
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Position
A13:complement(21677554..21680142)
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AA seq
436 aa
AA seq
DB search
MNTPGYYLTTIPSSSSSSLGSSMGMVYPDMGSLSLGQNYGILGSSVSSTQDSYGCKVPEM
ENERASWGFHFMGNCKTRSFEENHSSDVVEGQSSDCSDGFGDDSRTINLNAILNEENPND
NTVSGKETDSGQSKLCARGHWRPAEDTKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRW
FNQLDPRINRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYR
EQSTAYRRRKLSQSVYRKMEETPNFVCRDAATKAEPPPYCLNIPNRRLGTISHYQFGTFN
GANAGGNVGSNVSPHSSSEVPRTGFITQQPPFDFIPGVKSNDMMGIFSQTRSWDRPIDEP
QISGFYPHQHHHPSYIMAMQQSEFLSSQGLTDSAAPTAQISGSEPSSSVPGTKAATSSHY
ETVPPPFIDFLGVGAI
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgccaggctattacttaaccactattccctcttcttcttcatcttctcttggt
tcttcaatggggatggtttacccagacatgggttccctttctctcggtcaaaactatggt
attctaggctcaagtgtttcttccacgcaggacagttatggttgtaaggtcccagagatg
gaaaatgaaagagcttcttggggttttcatttcatggggaactgcaaaacaaggagcttt
gaggaaaaccatagctctgatgttgtggaaggtcaaagctcagattgcagtgatgggttt
ggagatgatagtaggaccattaatctcaatgccatcttaaatgaagagaaccccaatgat
aataccgtaagtggcaaggaaacagatagtggtcagtcaaagctttgtgcaagaggccac
tggaggcctgcggaagatactaagctcaaggaacttgtagctctttatggccctcaaaac
tggaaccttatagcagagaagttggaaggaagatctggtaagagctgcaggctaagatgg
tttaatcaattggaccctaggatcaatagaagagcatttactgaagaagaagaagagagg
ctaatgcaagctcatagactttatggtaacaagtgggcaatgatagctaggctgttccct
ggaaggactgataatgctgtcaagaaccattggcatgtgattatggcaaggaagtataga
gaacaatcgactgcctataggaggaggaaactgagccaatctgtttatagaaaaatggaa
gaaactccaaattttgtctgcagagatgcagccacaaaagctgaaccaccgccatactgt
ctcaacatccccaatagaagacttggcactatctcccattaccagtttggaaccttcaat
ggtgctaatgctgggggtaacgttggctctaatgtttcaccccactcaagcagcgaggtc
cctcgcacagggttcattacacaacagccaccttttgatttcatccctggtgttaagagc
aatgacatgatgggtattttcagccagaccagatcttgggataggcccattgatgaaccc
caaatctctggtttctatccccaccagcatcaccatccatcatacataatggcaatgcaa
cagtcagagttcctcagctcccaaggtctcacagattccgcagcaccaacagctcaaata
tcaggcagtgaaccttcatcatcagtgccaggtaccaaagcagcaaccagcagccactat
gagacagttccacccccattcattgactttcttggagtaggagccatatga
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