Gossypium hirsutum (upland cotton): 107894109
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Entry
107894109 CDS
T04793
Name
(RefSeq) PHD finger protein MALE STERILITY 1-like isoform X1
KO
K26271
PHD finger protein MS1/MMD1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107894109
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
107894109
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Gene cluster
GFIT
Motif
Pfam:
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
107894109
NCBI-ProteinID:
XP_016674811
UniProt:
A0A1U8I9B7
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Position
A12:complement(104764243..104767086)
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AA seq
704 aa
AA seq
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MEGFMFFKQFMQIVNHLQIYFPSTTCVNPSSCISKDVTPYLCFPTSFKKMSSYLDLGGCR
KRRRGGERVFKFKTFGENGCPVEFDGSFRDNVKAIVEYGHLEINLCSNGVFSWSFQLEVH
RHPPLHVVLFIVEEQIQASSLSSINLHCKHCQYVGWGHHMMCNKKYHFLLPSKDTVAACF
NCDETSFDDPNPEKGKFNLVELKGHIMHGVFHSNGFGHLLCVNGMEMGSDQLAGYQIMEF
WDRLCTGLQARKVSLNDTSKKRGMELRLLYGVAYGHPWFGRWGYKFGRGCYGVNQPIYQK
AIEAIQGIPLCLLNHHLSISNNDISVIFSRYQALSDHSMVTLGDLFHFMLELRSRLPKEN
SIDSCNPSTVETNCRWSPKRVEAATRVIVEALKKAEFRWVSRQEVRDAARAYIGDTGLLD
FVLKSLGNHIVGNYLVRRCLNPVTKVLEYCLEDISTVFPNSEALIINNSKAKPRCKITKV
QLMKDIAYLYRHILKDQKATLSTGVFSAIPMATRIILDTKFLVKEYTEELSMKGNSNCSN
GKTFKLLCTVISRSDEIDEALMKPLPPYECVCLKENATFDELKQEVEKNFREVYWRLRNF
VVETIVNLSVKGSDLVMGSVEMGQKLVFIGSNEDQIGMDDGGGSGIVDCLCGAKEDDGER
LISCDICEVWQHTRCVRIPNNEEIPHVFLCKQCEEKIVFLSSLP
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggagggttttatgtttttcaaacaattcatgcagatagtgaatcatctccaaatttat
ttccccagcacaacctgtgtgaacccaagcagctgtatatcaaaggatgtaaccccatac
ctttgctttcccacaagcttcaaaaaaatgtcatcatatttggatttgggtggttgtagg
aagagaagaagaggaggagaaagggttttcaagttcaaaacctttggtgagaatggttgt
ccagttgagtttgatgggtcatttagggataatgtcaaagcaattgttgaatatgggcat
ttagagattaatctctgcagcaatggggtttttagctggtcttttcagcttgaagtccat
cgtcatcctcctttgcatgtagtgttgtttattgttgaagaacaaatccaggcatcttca
ttatcatctatcaaccttcattgcaagcattgtcaatatgttggctgggggcaccatatg
atgtgcaataagaagtatcattttctgctaccatctaaagacactgtagctgcttgtttc
aactgtgatgaaaccagctttgatgacccaaatccagagaagggtaagttcaatttagtg
gaattaaaaggccatataatgcacggtgtgtttcattctaatggatttgggcatttacta
tgtgtcaatggcatggagatgggttcggatcaattggctggatatcagattatggaattc
tgggatcgtttatgtactggtttgcaagccaggaaagtgagtttaaatgatacctcaaag
aaacgaggtatggaattgaggctgctttatggagtagcatatggtcatccctggttcggt
cgttggggatacaaattcggacgaggatgttatggcgtaaaccaaccgatttatcaaaaa
gccattgaagcaatccaggggatacctttgtgcttgctaaatcatcatctcagcatttca
aataatgacatttctgtcattttctctaggtatcaagcattgtctgaccattccatggtg
accctcggtgacctgtttcatttcatgttggagttgaggtcaagacttccaaaagaaaat
tcgattgattcatgtaacccttcaacagtagagactaactgcagatggtcaccgaagaga
gttgaagcggccactcgggtgatcgttgaagctctaaaaaaggccgagttcaggtgggtt
tcgaggcaagaagtaagggatgctgcaagagcttatattggtgacacagggttgctagat
ttcgttctcaaatcacttgggaatcacatagtggggaactacttggttcgtcgttgctta
aatccagtaactaaagtgctagaatattgcttggaagatatttccactgtgtttcccaac
tctgaagccctcattataaacaattcaaaagcaaagcctagatgtaagatcacaaaggtt
caactaatgaaggacattgcatatttatacaggcatatcctgaaagatcaaaaggcaaca
ttgagtacaggggttttttcagcaataccgatggcaacccggataattctcgacactaaa
ttccttgttaaagaatatacggaagagctttccatgaagggcaactcgaactgctcgaat
gggaaaacattcaagctcttgtgtacagttatatcgagaagcgatgagatagatgaagcg
ttgatgaagccgttgcccccatacgagtgtgtatgtttaaaagaaaacgctacgtttgat
gagctcaaacaagaggtggagaagaatttcagggaagtgtattggaggctgaggaatttc
gttgtggaaacaatagtgaatttgagtgtgaagggatcggatttggtaatggggtcagtc
gaaatgggtcagaaacttgttttcattggcagcaacgaagatcagatagggatggacgac
ggtggtgggtcagggattgtggattgcctttgtggagctaaagaggatgatggtgaaagg
ttgatatcgtgtgatatttgtgaagtttggcaacatacaaggtgtgttaggattccaaat
aatgaagaaatcccacatgttttcctctgcaaacaatgtgaggaaaagattgtgttcttg
tcttctttaccctaa
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