Gossypium hirsutum (upland cotton): 107894500
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Entry
107894500 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107894500
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107894500
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
107894500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
Prok-RING_1
zf-Nse
Rtf2
zinc_ribbon_16
Prok-RING_4
RINGv
Baculo_RING
zf-RING_4
PHD_NSD
zf-RING-like
PHD
zf_RING_Vps8
Tmpp129
Motif
Other DBs
NCBI-GeneID:
107894500
NCBI-ProteinID:
XP_040931054
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All DBs
Position
A08:complement(122631147..122632554)
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AA seq
382 aa
AA seq
DB search
MFSTAKHGIVFVLFLLLFLSPPPSTAQPTDPNNDRYPYARFTPSMAIIVVVLISALFFMG
FFSIYLRNCSEANANGSVVRPFNGETGRSRRGMRGLEPSVIETFPTMVYSEVKVHKIGKG
ALECAVCLNEFEDEETLRLIPKCDHVFHPDCIDAWLASHTTCPVCRANLAPQPGDPVSQP
AELDNTTTELDLEAQNYDDDSELEEERRINPNNINSDAEAQVAPEVEVIDLNRTLNRNRT
RGSISSRTRKFFFLRSHSTGHSLVQPGENTDRFTLRLPVDVRKQLINRKLNRATSLVLPR
ERSSRRGYRTGEDGGGSSRGKLFRSLDKSDGGVKSDRWVFSMTPPFFSRVSSTKSPKVTA
NNGEDASSLPAEPAGDSSRPPV
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaccgccaaacatggaatcgttttcgttcttttcctactccttttcctctct
ccgcctccctccaccgctcaacctaccgacccgaacaacgaccgttacccttacgcccgt
ttcaccccttccatggctatcatcgtggttgtcttgatttccgctttgttctttatgggt
tttttctctatttatcttcggaactgctccgaagccaacgccaacggaagcgtcgtccgc
cctttcaatggcgaaactgggcgttctcgccgtgggatgcgtgggcttgagccgtctgtg
atcgagactttccccaccatggtttactccgaagtgaaagttcataagatcgggaaagga
gctttggagtgcgcagtttgcttgaacgagttcgaagatgaggaaacgctgcgtttaatc
cccaaatgcgaccacgttttccaccctgattgtatcgacgcttggttggcttctcatact
acctgccccgtttgtagagctaatctcgctcctcaacccggtgaccctgtgagccaaccc
gccgagttggataacaccaccaccgagttggacctcgaggctcagaactacgacgatgac
tcagaactggaagaagaaaggaggataaatcctaataatattaactccgatgcggaggct
caagttgcgccggaagttgaagtaattgacttgaaccgaactttaaataggaaccggaca
cgtggatcaatatcaagcagaacacgtaagttctttttcctgcgatctcactcaaccggg
cactctttggtccaaccaggtgaaaacacagaccggttcactttgcggttaccggttgat
gttcgaaaacagttaataaaccgaaagttaaatcgagcaacgagcttggtgttgcctagg
gaaagaagctcaagacgaggataccgaaccggagaagacggtggtggaagtagtagagga
aagctttttcgatcacttgacaaatctgatggcggagtcaagtcggaccggtgggtgttt
agtatgacaccaccgttttttagtagagtatcttccacgaagtcgccaaaggtaacagct
aataatggcgaagatgcctcaagtttgccggctgaaccagcgggtgactcaagccgtcct
ccggtttaa
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integrated database retrieval system
