Gossypium hirsutum (upland cotton): 107894691
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Entry
107894691 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170 isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107894691
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107894691
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107894691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
107894691
NCBI-ProteinID:
XP_040940490
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Position
A13:complement(4641634..4644354)
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AA seq
214 aa
AA seq
DB search
METEVKERNFEESRGNKRFTETPPDDDCCPICFGSFTVPCRSNCGHWYCGSCILQFWNYS
SASMPCKCPMCACKIVNLMPEASLQQQQDQEVTQVLKSVQRYNLLFVGGALGYIQQKLRQ
LPFFMKKIFQGLMDPDANDTYIAEMRLFAMLLSIIYRATPFDFLPTGGVGIGRVFDFSAI
TLVLILRLVGIYRRRQLMQRVRQVATVELLREGT
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagaggtaaaagaaagaaactttgaggaatctagagggaacaagaggtttaca
gaaacccctcccgatgatgattgctgcccaatttgctttggttctttcaccgttccttgt
cgatccaattgtggccattggtattgtggcagttgcattttgcaattctggaactattca
tcagcatctatgccatgcaagtgccccatgtgtgcttgcaagattgttaacttgatgccc
gaggcatcgctgcagcaacagcaggaccaagaagttactcaggtacttaaaagcgtacag
aggtataaccttctctttgtaggaggtgcgctcggatacattcagcagaaactacgtcag
ttaccattcttcatgaagaaaatattccaaggattgatggatcctgatgcaaatgacaca
tatattgccgagatgcgcctttttgcaatgctattaagtatcatctacagagccacacct
tttgatttccttccaacagggggcgttggaatcggaagagtgtttgatttttcggccatt
actctagtactcatcctgcgtttggtcggcatctatcgcagaaggcaacttatgcaacgt
gtgaggcaggtagcaactgttgaacttttacgggaaggaacttag
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