KEGG   Gossypium hirsutum (upland cotton): 107894697
Entry
107894697         CDS       T04793                                 
Name
(RefSeq) DNA repair protein REV1-like isoform X1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    107894697
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107894697
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    107894697
SSDB
Motif
Pfam: IMS IMS_HHH_1 IMS_C BRCT BRCT_2 POLH-Rev1_HhH LIG3_BRCT IMS_HHH UBM DUF1805
Other DBs
NCBI-GeneID: 107894697
NCBI-ProteinID: XP_040940543
LinkDB
Position
A13:complement(5630374..5645689)
AA seq 1134 aa
MSADSSNSKRSFNSNSSNNQSNSSKKRKSNQRTLGMAWGSNSLSSSRSSFRSSPFSDFGS
YMVVKNKKLQNQFDAEASNSTRSDSSVKLIFHGVSIFVDGFTVPSSQELRQYMLNHDGRF
ENYFSRHRVTHIICSNLPDSKIKNLRSFSSGLPVVKPMWILDSVAANKLLSWVPYQLDQL
ANNQPTLSAFFTTKCKPADEGAFTNAICEVKHENEVLCLKDASKDASFSEAGNSFERRKQ
ATEENDELMYENTDKTVTDGPSKSYSEEPEEVKVVEQSNLQEEDESMENYRLQSCPEQST
SSVSSHCFDNHGIRGSPTSTVIGPSKHRHSTLGDPNFVENYFKNSRLHFIGTWRNRYRNR
FPSLSNGFTKSHSNVSAGTQKTPIIHIDMDCFFVSVVIRSHPELNGKPVAVCHSDNPKGT
AEISSANYPARDYGIKAGMFVRDAKSLCPQLVILPYNFEAYEEVADQFYNILHKHCNRVQ
AVSCDEAFLDVTDLEGKDPQLLASAIRKEISEATGCTASAGIAENMLMARLATRTAKPNG
QCYIHPERVDEYLDQLPIKVLPGIGHVLAEKLKIKNVRTCGELRLISKDSLQKDFGIKTG
EMLWNYSRGMDNRLVGMIQESKSVGAEVNWGVRFRDLQHAQHFLLDLCKEVSLRLQGCGV
QGRTFTLKIKKRRKDAGEPAKFMGCGDCENLSHSTTVPLATDDIEVLQRISKQLFGSFHI
DVKDIRGVGLQVSRLESVGNSRQAPERNSLKSWLMSASTSSKQRFDINRIAKECVDSEGK
SVGGNSGVLRIASGENSVHETNNAPNGEGRSNQSSSVPPLCHLDMGVVENLPSELLSELN
EIYDGKLVGLITKRKVQGDKSTGSACFFPPERAQVAVEEAERSRNSASVSLRRTALEMKD
TQYILEELQMVPDSEARPDSVAISTAGLENNDLVPSSLSQVDTSVLQQLPEELRADICEA
LPAHRMPEGTALGPRTDNMHPPLGIKTTTDNQPGSTDSGLRNNLWIGDPPLWVDKFKVSK
LSTLNFFVDMYYKANSAKSLSSILQCIIAESLHPLNARCDAWNEAIHSFSELLMNYIKLK
MVVDIEEIYVCFRLLRRLSTKSQFFLEVYNLVFPHLQASVDENYGGTLHIPPIK
NT seq 3405 nt   +upstreamnt  +downstreamnt
atgagtgcggattcctctaattcgaaacgaagtttcaattcaaattcttcgaacaatcaa
agtaatagcagcaagaagaggaaaagtaaccagagaaccctaggcatggcttggggcagc
aattctctatcttcctctcgctcctcttttcgctcttctcctttctctgattttggaagt
tatatggtagtgaagaataaaaagcttcaaaatcagtttgatgcagaggcttcgaattct
actcgtagcgattcttctgtgaaacttatttttcacggggtttctatatttgttgatggt
ttcacggttccatcaagccaggagctgcgacaatatatgttaaaccacgatggtcgattt
gagaattatttttcaaggcatagagtcacacatatcatctgcagcaatcttcctgacagt
aaaatcaagaatctcaggtcatttagcagtggacttcctgtagtgaaacctatgtggatt
ctagattctgttgctgccaacaaacttttgagttgggttccttaccagcttgaccagctt
gctaacaatcaacctacattgtcagccttcttcactacaaaatgtaaacctgcggatgag
ggtgcttttacaaatgctatttgtgaagtaaaacatgaaaatgaggttttatgtttgaag
gatgcatcaaaggatgcaagtttttctgaagcaggtaattcctttgaacggaggaagcaa
gctactgaagaaaatgatgagcttatgtatgaaaatactgataaaacagtaactgatggg
ccaagtaaaagctatagtgaagaacctgaggaagtaaaggtggtagaacagagtaatctg
caggaggaggatgaaagcatggaaaattacagacttcagtcctgtcctgaacagtccact
tcatctgttagtagccattgttttgacaatcatggtataagaggatcacccacatcaaca
gtcattggaccttccaagcatcggcattcaactcttggggatcccaattttgtggagaat
tacttcaagaattcaaggctgcatttcattggaacctggagaaatagatatcgaaaccgt
tttcctagtttgtcaaatggatttacgaagtctcattcgaatgtctctgctggtactcaa
aagactcccattatccatattgacatggactgtttttttgtctcggtggttatcaggagc
catcctgaattaaatggcaagcctgtagctgtatgccattcagacaatccaaaaggaact
gctgaaatctcttctgcaaattatcctgctcgagattatggaatcaaggcaggaatgttt
gttagagatgccaagagtctatgcccccaacttgttattctcccgtacaactttgaagca
tatgaggaggttgccgatcaattctataacatcttgcataaacactgcaacagagttcag
gctgtcagctgcgatgaagcatttttagatgtcacagacttagaaggtaaagatcctcag
cttttagcttcagcaatacgaaaggaaatatctgaagctacaggatgcactgcgagtgct
gggattgcagagaacatgcttatggcccgtctagccactagaactgctaaaccaaatggt
caatgttatatccatcctgagagggttgatgagtacttggatcaacttccaataaaagtt
ctccctggaataggtcatgtactggctgaaaaattgaaaattaaaaatgttcgaacttgt
ggggagttgcgtttgatttcaaaggactccctgcaaaaagattttgggattaaaactggt
gagatgctctggaattacagtagaggaatggataatcggcttgttgggatgattcaggag
agcaagtctgtgggtgctgaagtgaactggggtgtaagattcagggatcttcaacatgct
cagcatttccttttagacctttgcaaagaggtctcgttacgcttgcaagggtgtggggtg
caagggcgtactttcacacttaagataaaaaagagaagaaaagatgctggagagcctgca
aagtttatgggctgtggagactgtgaaaacctgagccatagcacaacggttccacttgct
actgatgatattgaagtgcttcagaggatttcaaagcagctctttggatctttccacata
gatgtcaaggacatccggggtgttggtttgcaagtttcaaggcttgaaagcgtaggtaat
tctaggcaagcacctgaaagaaactctttgaaatcatggctcatgtctgcatcaacgagt
tcaaagcaacgatttgatatcaatagaatagccaaagaatgtgttgattctgaaggaaag
agtgtgggtggaaattcaggtgtgttacgcattgcttcaggggagaattctgttcatgag
acaaataatgcacctaatggtgagggacgttctaaccagagctcaagtgtcccaccttta
tgccaccttgacatgggagtagtggagaatcttccttcagagctcctctcagaattaaat
gaaatttatgatggaaagctagttggattgattaccaaaagaaaagtacaaggtgacaaa
agcactggatctgcatgcttctttcctcctgaacgagcccaagttgcagtagaggaagca
gaaagatcccgtaattctgcttctgtttcattgagaagaacagcattggaaatgaaggac
acacaatatatattggaggaactgcagatggtgccagactctgaggcaagacccgatagt
gttgcaatttccactgcaggacttgaaaataacgatttagtgccttcatctcttagccaa
gtagacacatctgtgttacagcagctgcctgaggaattgagagctgacatatgtgaggca
cttcctgcgcacaggatgccagaaggtactgccctgggcccgagaacagataacatgcat
cctcctttgggcatcaagactactactgataatcaacctggatcaactgattctggtttg
cgcaacaatctctggattggagatcctcctctttgggttgataagtttaaagtcagcaaa
ttgtcaacattgaatttttttgttgacatgtattacaaagcaaattcagctaagagttta
tcttcgatactacaatgcattattgctgaatccctacatcctttaaatgcaagatgtgat
gcttggaatgaagctattcacagcttcagtgagcttctcatgaattatattaaactgaag
atggtagtagatattgaggagatctatgtttgttttcgtcttctaagaaggttaagtacc
aagtcacagttcttcttggaagtgtacaatttggtctttccccaccttcaggcgtctgtc
gatgaaaactatggtggaaccttgcatatacctccaatcaagtag

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