Gossypium hirsutum (upland cotton): 107895033
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Entry
107895033 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107895033
04121 Ubiquitin system [BR:
ghi04121
]
107895033
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107895033
Membrane trafficking [BR:
ghi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107895033
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107895033
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-ANAPC11
Zf_IFT144_1st
zf-RING_UBOX
zf-C3HC4_3
GAS2
FAR1_N
Motif
Other DBs
NCBI-GeneID:
107895033
NCBI-ProteinID:
XP_016675714
UniProt:
A0A1U8IIK8
LinkDB
All DBs
Position
D13:complement(34353532..34355425)
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AA seq
330 aa
AA seq
DB search
MGDRQAGRYWCYMCSRVVNPTTEPEIQCPLCDSGFLEEVGSIRSHSNINHAAIDTESPNS
LSLWAPIVLGLMGSSSQLRIASRDQVTQDDELGREVESLIRRRTSSSALPLRMLQGMRTV
AAASESENGGNGSGRMILFDPINDEALVVQGSFDVTNRVQTHNPSHRSAGTFGDYIMGPG
WDLLLQYLSENDPNRHGTLPAWKEAVEAMPTVTVNGNVQCAICLEDIEIGNEAKEMPCEH
KFHDGCIIPWLELHNSCPVCRFQLPLDDSKTEPNGNRNSGRIGTGRRHWIPIPWPYDGLV
TLPGSQSESTSPPSLEAIPGSENAAQGDDN
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgggggataggcaagcaggtaggtattggtgttacatgtgttcccgagtggtgaatcca
acgacagagcctgaaatccaatgccctctctgtgattctgggtttctggaagaagttggc
agcataagatcccattccaacatcaatcacgccgccatcgatacagaatctcccaacagt
ctttcactttgggctccaatcgtgcttggtttgatgggttcatcatcacagctgcgtatt
gcaagcagggaccaagtaacacaggatgatgaactggggagagaagtggagtccttgata
agaaggagaacctcatcttcagccctgccccttaggatgcttcaaggtatgcgtacagta
gcagcagcttctgaatcagaaaatggtggaaatggaagtggtagaatgatcttgtttgat
ccaatcaatgatgaagccttggttgtccaaggttcatttgatgttactaaccgtgttcaa
actcataacccgagtcataggtctgccggaacctttggtgattacatcatgggacctggt
tgggatcttttgttgcagtatttgtctgagaatgatccaaaccgacatggaaccctacca
gcttggaaagaagcagttgaagcaatgccaactgttactgtaaatggcaatgtgcagtgt
gcaatatgtttggaggatattgagattggaaatgaagcaaaagagatgccgtgtgagcat
aaattccatgatgggtgtattattccatggcttgaacttcataactcttgtcctgtctgc
cggtttcagttgccgttggatgattccaagaccgagccaaatggcaacaggaatagtggc
aggataggaactggaagaaggcattggatccctattccatggccttatgatggtttagtc
accttacccggttctcaaagtgaatccacttcacctccctcattagaggctattccagga
agtgaaaatgcagctcagggagatgataactga
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