Gossypium hirsutum (upland cotton): 107895080
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Entry
107895080 CDS
T04793
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03430
Mismatch repair
ghi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107895080
03460 Fanconi anemia pathway
107895080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107895080
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
107895080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
107895080
NCBI-ProteinID:
XP_016675781
UniProt:
A0A1U8IC38
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Position
A13:complement(85501808..85516452)
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AA seq
728 aa
AA seq
DB search
MEIEPAEEVKEPPRIHRLDESVVNRIAAGEVIQLPVSAVKELVENSLDASSTSISVLVKD
GGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHV
TVTTITRGQLHGYRVSYRDGVMENEPKACAAVKGTQIVIENLFYNMVARRKTLQNSADDY
TKIVDLLSRFAIHHIDVSFSCRKHGAARADVHSVATPSRLNAIRSVYGLSVAQNLIKIEA
SDNDPSSSVFEMDGFISNSNYVAKKTTMVLFINDRLVECTALKRALEVVYVATLPKASKP
FIYMSITLPPEHVDVNVHPTKREVSLLNQEVIVEKIQSVVESVLRNSNESRTFQEQTVEA
TPSVPSVTNNDLHLSPSPSGSKSQRVPVNKIVRTDSSDPAGRMHAYLYKNPQKYLGRDSS
LTTVRSSVRQRRNLKETADLTSIQELINDIDRKCNSGLLDIVRQSTYIGMADDVFALLQH
NTHLYLANVVNLSKELMYQQVLRRFAHFNAIQLSEPAPLQELIMLALKEEDSDLESNEND
DLKKKIAEMNTQLLNQKSEMLEEYFCIFIDSDGNLSRLPILLDQYIPDMDRVPEFVLCLG
NDVEWEEEKNCFQSLAAALGNFYAMHPPMLPNPSGKGLEFYRKRKHGKHTQDGGNSCHVA
DGTAEEDEFEHELLSEAETAWAQREWSIQHVLFPSMRLFLKPPNSMASNGTFVRVASLEK
LYKIFERC
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagaacccgccgaagaagttaaagagccacccaggatccaccgcctggacgag
tctgtggtcaaccgaatcgctgccggagaggtaatccaactccctgtctccgccgtcaaa
gagctagtcgagaatagtttagacgcttcctccacttccataagcgtccttgtcaaggac
ggtggtcttaaactcattcaagtctccgacgacggccatggcattcgatatgaggacttg
cctatattgtgcgagaggcatacgacgtcgaagttgtcgaaatacgaggatttgcagtca
ataaagtcgatgggttttagaggagaggcgttggctagcatgacatatgtgggtcacgtt
accgtcactaccattactcggggccaattgcatggatacagggtgtcttatagagatggt
gtgatggagaatgaacctaaggcatgtgctgctgtgaaaggaacccaaatagtgattgag
aatttgttctataacatggttgctaggaggaagacactgcaaaattctgctgatgattat
actaaaattgtagacttgctaagccgctttgccattcatcatatagatgtgagcttttct
tgtagaaagcatggagctgctagagcagatgttcactcggttgcaacaccatcaaggctt
aatgctatcagatctgtttatgggctttcggttgctcagaatctgataaaaattgaagct
tcagataatgatccttctagctcggtctttgagatggatggctttatctccaactcaaac
tatgttgcaaagaaaaccacaatggtgctatttattaatgatagattggttgaatgcact
gctttaaagagagctcttgaagttgtttatgttgcaaccttaccaaaagcttcaaaacct
ttcatttatatgtcaattacattgccacctgagcatgttgatgtgaacgtgcaccctaca
aagagagaggtaagccttttaaatcaggaagttattgttgagaagatacagtctgtggtt
gaatcggtgttgagaaactcgaatgagtcaaggacatttcaagaacagacggttgaagcc
actccatctgttccctcagttacaaacaatgatttacaccttagtccctcaccctctgga
tcaaaatcacagagagttccagtcaacaaaatagtgagaacagattcatcagatccagct
ggacggatgcatgcctacttatataagaatccccagaaataccttggaagagattctagc
ttgacaactgtgaggtcatctgttagacaaagaagaaacctgaaggaaacagcagatctt
actagcattcaggagcttattaatgatattgatagaaaatgtaactctggtctgctggac
attgtgagacaaagcacttatattggaatggctgatgatgtttttgcattgcttcagcat
aatactcatctctatcttgctaatgtggtgaacttaagcaaagaacttatgtatcagcaa
gttcttcgtcggtttgctcattttaatgctatacaactaagtgaaccagctcctttgcaa
gagttaatcatgttggccctgaaggaggaggactcagacctagaaagcaatgaaaatgat
gacctcaaaaagaagattgcagaaatgaatacacagctgcttaatcaaaagtctgaaatg
ttggaggagtatttctgcatttttattgattcagatgggaatttatctagactgccaatt
ctacttgaccagtacattccagacatggatcgtgttcctgaatttgtgctatgtttgggc
aatgatgttgagtgggaagaagaaaaaaattgcttccaatcacttgcagctgctcttggg
aatttttatgctatgcatccgcctatgttgccaaatccatcaggcaaaggattggaattt
tacagaaaaaggaaacatgggaagcatactcaagatggaggaaattcttgtcatgtggca
gatggtacagcagaagaggatgaattcgaacatgaactactgtcagaggctgagactgca
tgggcccagcgtgaatggtcaatccaacatgtcttgtttccatccatgagactatttcta
aaacctccaaattcaatggcctctaatggaacatttgtcagggtggcttcactggagaag
ctctacaagattttcgagcgatgctag
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