Gossypium hirsutum (upland cotton): 107895147
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Entry
107895147 CDS
T04793
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107895147
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107895147
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107895147
03036 Chromosome and associated proteins [BR:
ghi03036
]
107895147
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107895147
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107895147
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107895147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
wHTH-Calcineurin_assc
Cas9_C_2
Motif
Other DBs
NCBI-GeneID:
107895147
NCBI-ProteinID:
XP_016675882
UniProt:
A0A1U8ICS0
LinkDB
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Position
A08:123384562..123390724
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AA seq
539 aa
AA seq
DB search
METVAVGDIACLDAELLQLQEVSPLALKSYPDFTQKLFEQWLSLPATYKLVTSLINDAKA
GNPLNVPGSTSSGSTATSNTLPSMFPAGSAPPLSPRSTSGSPRIAKQRAGPSNLGSPLKV
VSEPVKELIPQFYFEKGRLPPKELKEQCISQISQFFCGHPDGLQLPEFKLVTKEICKLPT
FFSTSLFRKVDVNNTGLVTRDAFIDYWINGSMLTMDIATQIFTILKQPDLKYLTQDDFKP
LLQELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRAGNGRLTLRELKRGNLVHAML
HADEEDDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYSNHALTYRIVDRIF
SQVPRKFTSKVEGKMGYEDFVYFILAEEDKSSEPSLEYWLKCIDLDGNGVLTRNEMQFFY
EEQLHRMECMAQEPVFFEDILCQIMDMIKPEDDSCITLRDLKGSKLSGNAFNILFNLNKF
MAFESRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDVEDASNGSAEVWDESLEAPF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggagactgttgctgttggagatattgcgtgtttggatgcggagctattgcaactccag
gaggtgtctcccttagctctcaaatcctatcctgacttcactcaaaagcttttcgaacag
tggctttctcttcccgcgacttacaagctggtaacgtcattgattaatgatgcaaaggcg
ggtaatcccttgaatgttcctggaagtacttcatctggaagtactgccacaagcaatact
ttaccttccatgtttcctgctggcagtgctcctcccctttcaccaagaagtacatctggt
tcccctcgaatagcaaaacaaagggctggtccttcaaacttgggttctccactgaaagta
gttagcgagcctgtgaaagaattaataccacagttttactttgaaaaaggccgtctacct
ccaaaggaactaaaagaacaatgcatatctcaaatcagtcagtttttctgtggccaccca
gatgggctgcaactgcctgaattcaaactagtgaccaaggaaatctgcaagctgccaaca
tttttctccacatcacttttcagaaaagttgatgttaacaacactggtttggttacaaga
gatgcttttattgattattggatcaacggcagcatgttgacaatggatatagcaacacaa
atatttacaatattaaagcaaccggatctcaaatacctcactcaggatgactttaaacct
ttactccaagaactattggcaactcatccagggttggagttcttacagagtacaccggag
tttcaggaaagatatgctgaaactgtaatataccgaatattttactacataaatagagct
gggaatggtcgcctcactcttagggagttgaaacgtggaaacttggttcatgccatgcta
catgctgatgaggaagatgacattaacaaagttttgaggtacttttcatatgaacatttt
tatgtaatatactgcaaattttgggagctggatacagatcatgatttcttgattgacaag
gagaaccttatcagatacagtaaccatgcgcttacctaccggattgttgataggatattt
tctcaggttccaagaaagtttaccagtaaggtggaaggaaagatggggtatgaagatttt
gtttactttatcctagctgaggaggacaagtcatccgagcctagtcttgagtattggtta
aagtgtatagatttggatggcaatggagttctaacacgtaatgaaatgcaatttttttat
gaggagcagttgcatcgaatggaatgcatggcgcaagagcctgtgttctttgaggacatc
ttatgtcagataatggacatgattaaaccggaggatgacagctgcatcacattgcgtgac
ctaaaaggttctaaactttcaggaaatgctttcaatatccttttcaatctcaacaaattc
atggcctttgaatctcgcgacccgttcctcattcgtcaggaacgtgagaatcctacattg
acggaatgggaccgttttgcacatagagaatatattcggctttcaatggaagaagatgtc
gaagatgcctctaatggaagtgcagaagtttgggacgaatcacttgaggctcccttctaa
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