Gossypium hirsutum (upland cotton): 107895246
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Entry
107895246 CDS
T04793
Name
(RefSeq) probable E3 ubiquitin-protein ligase ZFP1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107895246
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107895246
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107895246
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-RING_11
zf_RING_Vps8
zf-ANAPC11
zinc_ribbon_16
zf-RING_16
PHD_NSD
zf-RING_Vps41
FAR1_N
Motif
Other DBs
NCBI-GeneID:
107895246
NCBI-ProteinID:
XP_016676017
UniProt:
A0A1U8ID56
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All DBs
Position
A13:97352881..97357121
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AA seq
528 aa
AA seq
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MGQRNMLCPNQMIDLEMDQQGQGYLHPEPCIFMGGRPNYPPPDIQMGVTAPGNATSLDTH
PLPEHYDSGMFYGLPQYPGVQHHNHSPNLDLGIGSASNYYIPYVANPSSSAPVNHGPADQ
MPSSSNFNLLGVSANEYARNCHFMDNVSGSYKRKNSEGVPGNFPHFNAPSSSSSSVTPLS
SRHPDGVGTMDGASFNIPQYRGNGPPTIREAGPQRSVRNRLGATPVEPVLMHSANHVFQG
NYIRQPFQPTITDGGASAWTQVPGVPYMHGSNVGAPMETSLRSSTNFSHASPLELRNHNF
HHPAPPIEGVRGHSINIHPQVAAVPPRFPASYASQSSMNLSHDGWEMGRRHLGPVPPSGF
RLYHSRRESGIVPETTVRHRNLPHLRVLPPDGVAVLELPEFYEVGNFIDHHRDMRLDIED
MSYEELLALGERIGNVNTGLSEETITSKLKTRSYSTFATTINLEEAAPIDQEPDSCIVCQ
EDYKNQEKIGTLDCGHEYHAGCLKKWLVVKNVCPICKSEAIATESKNV
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgggccaaagaaatatgctatgccctaatcagatgatagatttagaaatggaccagcaa
ggccaaggatatctacatcctgagccctgcatctttatgggtggcaggcctaattaccct
ccacctgatatccagatgggagtcacggctccagggaatgctactagtcttgatactcat
cccctaccagagcattatgacagtggtatgttctatgggttaccccagtacccaggtgtt
cagcatcataatcattccccaaatcttgatcttggtattggaagtgcgtccaactattac
atcccctatgtggctaacccttcgtcgagtgctcctgtaaatcatggaccagccgaccag
atgccatcttcaagcaacttcaacctcctaggagtttctgcaaatgaatatgcaaggaat
tgccacttcatggataatgttagtggctcgtataagagaaagaattctgaaggagtccca
ggaaattttccgcattttaatgccccatcaagctctagttcctcagttacaccattaagt
tctagacatcctgacggagttgggacaatggatggtgcatccttcaacattcctcagtat
aggggaaatggccctccaacaattagagaagcaggacctcaaagaagtgtgaggaacaga
ttaggcgcaactccagtggaacctgttttgatgcatagtgctaaccatgtttttcaagga
aactacatacgtcagccctttcagccaacaataacagatggaggtgcctcagcctggact
caggttcctggggttccatatatgcatggtagcaatgttggtgcacctatggagactagt
cttagaagttccacaaacttttcacatgcttctccccttgaacttcggaaccataatttt
catcaccctgcaccacctattgaaggagtaagaggtcacagcattaatattcatccacaa
gtagcagcagttcctcctcgctttccagcaagttatgcctcacaaagctccatgaatctt
tcgcatgatggttgggagatggggcgtaggcatctgggaccagttcctcctagtggcttt
aggttatatcattcccgccgagagagtggtatcgtacctgagacaactgtgagacaccgc
aatcttcctcacctaagagtacttccgcctgatggagttgctgtactggagctcccagaa
ttttatgaagtagggaactttattgatcatcacagagatatgcgcttggatatagaggac
atgtcttacgaggaactgcttgctctgggtgagcgtattggaaacgtgaacactggattg
tctgaggaaaccattacaagtaaattgaaaacaagaagttattcaacatttgctacaact
attaatctggaagaggcagcacctattgaccaggaacctgattcttgcattgtttgccag
gaggattataagaaccaagagaaaatcggaactcttgattgtggacacgagtatcatgca
ggttgcttgaagaagtggctggttgttaagaatgtatgccccatctgcaaatccgaggcg
atagccacagagtccaagaatgtataa
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