Gossypium hirsutum (upland cotton): 107895305
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Entry
107895305 CDS
T04793
Name
(RefSeq) solanesyl diphosphate synthase 1, chloroplastic
KO
K05356
all-trans-nonaprenyl-diphosphate synthase [EC:
2.5.1.84
2.5.1.85
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00900
Terpenoid backbone biosynthesis
ghi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
107895305
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ghi01006
]
107895305
Enzymes [BR:
ghi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.84 all-trans-nonaprenyl diphosphate synthase [geranyl-diphosphate specific]
107895305
2.5.1.85 all-trans-nonaprenyl diphosphate synthase [geranylgeranyl-diphosphate specific]
107895305
Prenyltransferases [BR:
ghi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
107895305
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
HEPPP_synt_1
Motif
Other DBs
NCBI-GeneID:
107895305
NCBI-ProteinID:
XP_016676104
UniProt:
A0A1U8IJN9
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Position
A13:98377386..98381044
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AA seq
418 aa
AA seq
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MMSMTCHNLDFGTRVLDLVAVGSSSNSSIERHVVKNHGKTFATKVYGARRMACCRQNISR
TRVFSTNTSEALLDGVGQRTAPVLDLKKEAKSPISLANLFKVVADDLQTLNQNLQSIVGA
ENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAELVGLKDLTTKHRRLAEIIEMIHTASL
IHDDVLDESDMRRGKETVHQLYGTRVAVLAGDFMFAQSSWYLANLENLEVIKLISQVIKD
FASGEIKQASSLFDCDVKLEDYLLKSYYKTASLIAASTKGAAIFSGADRSVTEQMYEYGK
NLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKETKLREIIESEFCET
GSLDEAIELVKQCGGIERAQELAKEKADIAIKSLQCLPQSNFRLGLEDMVMFNLERID
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaatgacatgccacaatcttgattttggaacaagagtgcttgatttggttgct
gttggctcctcttctaattcttcaattgaaaggcacgtagtgaagaatcatggaaaaaca
tttgccactaaagtctatggagctagaagaatggcttgttgcaggcaaaacattagtaga
actcgtgtgttctccacaaatacttcagaggctctgcttgatggagtcggtcaacgtact
gcgccagtgttggatttgaagaaagaggctaaaagtcccatttcactagcaaacttgttc
aaagttgtagccgatgacctccagactctaaatcaaaatctccagtcaattgttggtgca
gagaaccctgttctaatgtctgcagctgagcagatctttggtgctggtggtaagagaatg
agaccggccctggtgttcttagtttcaagagctacggcagagttagtcggattgaaggac
cttactacaaagcatcggcgattagcggagatcattgagatgattcatactgcaagcttg
atacatgatgatgtattagatgaaagtgatatgcgaagaggaaaagagacggttcaccaa
ctgtacggcacgagagtagccgtactggctggggacttcatgtttgctcagtcgtcatgg
taccttgcaaatcttgaaaaccttgaagtcattaagctcattagccaggttattaaggat
tttgcgagtggtgagattaagcaggcatcgagtttgtttgactgtgatgtcaaacttgag
gactatttgctaaagagttattacaaaacagcttcattgattgcagctagtaccaaggga
gccgccattttcagtggagctgatcgtagtgtaacagagcaaatgtatgaatatggaaag
aatcttggcctatcattccaagttgttgatgacatattggattttacacaatcagcagag
cagctggggaagccagctggtagtgatctagcaaaaggcaacctcacagcacctgtaatt
tttgcgctcgaaaaggagacaaaacttagagaaatcattgaatctgagttctgtgagact
ggttcccttgacgaagcaatcgaactagtaaagcaatgtgggggaatcgaaagggcacaa
gagttggcaaaagagaaagctgatattgcaatcaagagtctccaatgtcttcctcaaagc
aattttcggttagggcttgaagatatggtgatgtttaatctagaaaggattgattag
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