Gossypium hirsutum (upland cotton): 107895427
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Entry
107895427 CDS
T04793
Name
(RefSeq) tryptophan synthase beta chain 2 isoform X1
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00260
Glycine, serine and threonine metabolism
ghi00400
Phenylalanine, tyrosine and tryptophan biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
ghi01230
Biosynthesis of amino acids
Module
ghi_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
107895427
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
107895427
Enzymes [BR:
ghi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
107895427
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Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
107895427
NCBI-ProteinID:
XP_016676203
UniProt:
A0A1U8IIJ5
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Position
A11:23147630..23151346
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AA seq
504 aa
AA seq
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MGTHSVFNPNPLPTFTSSTISTKGDKQWPGCLMLNGKQMHERLSNGFRGRARSVINVNST
AIEIPRQWYNLVADLAIKPLPPLHPKTFEPVKPEDLSPLFAYELIKQEVTYERFIDIPEE
VIDVYRLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNTAVPQVYYNAQQGVK
NVVTETGAGQWGSSLAFACSLFGLGCEVWQVRASYYQKPYRKLMMQTWGAKVHPSPSDIT
QAGRKILQMDPSSPGSLGIAISEAVEIAAANDDTKYCLGSVLNHVLLHQTVIGEECIRQM
EAIGETPDLIIGCTGGGSNFAGLSFPFIREKLKGKINPVIRAVEPAACPSLTKGVYAYDF
GDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLISHVHELGFMEAISIPQTECFQG
AIRFARSEGIIPAPEPTHAIAATIQEAVRCRESGESKVILMAMCGHGHFDLASYEKYLQG
SLVDLSFEEEKIKESLAKVPQVQA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgggtacccactcagttttcaatccaaacccacttcccacctttacttcgtccaccatt
tccactaaaggtgacaagcaatggcctggatgtcttatgcttaatggaaaacaaatgcat
gaaaggctttccaacggttttaggggaagagcaagatcagttataaatgtcaattctaca
gcaatcgaaattcctcgtcaatggtacaatctggttgctgatctagctataaagcctctg
cctccattgcatccgaaaacattcgaaccggttaaaccagaagatttgtctcctttattt
gcctatgaactaattaagcaagaggttacctatgaaaggttcatagatattccagaagaa
gttatcgatgtatacagactttggcgcccgacccctttaatcagagccaagaggttggag
aagcttcttgatacacctgctcggatttattacaagtacgaaggtgtcagccctgccgga
tcgcataaaccgaacactgcagttccgcaagtttactacaacgcacagcaaggggtcaag
aatgtcgtgaccgaaactggtgctggccaatggggtagttcattggcctttgcctgcagc
ttgttcggtcttggctgtgaagtgtggcaagttcgtgcttcttactatcagaaaccatat
cggaaattgatgatgcaaacatggggtgcaaaggttcatccttctccatctgacattacc
caagcaggtcgtaaaatacttcaaatggatccctctagcccgggaagtttagggatagct
atttcagaagccgtagagattgccgctgcaaatgatgataccaagtactgcctggggagt
gttctaaatcatgttttgctacatcaaaccgtgataggagaggagtgtattcgacaaatg
gaggccatcggtgaaaccccggacttaatcatcgggtgtaccggcggtggctcgaatttc
gcaggacttagtttcccatttatcagagaaaagctcaagggaaaaatcaaccctgttata
cgagcagtcgaacctgcggcttgtccttcattaacaaaaggtgtctatgcatacgatttt
ggtgatactgcagggatgactccattgatgaagatgcatacactggggcatgatttcatt
ccggatccaattcatgccggtggcttacgttaccatggtatggcacctttgatttcgcac
gtccatgaattaggcttcatggaagcaatttcgatcccacaaactgagtgctttcaaggc
gcaatacgatttgcgcgatctgaagggataattccagctcccgagccaactcatgctatt
gcagctactatccaggaagctgttcgctgcagagagagtggggaatcaaaggtgatattg
atggcaatgtgtgggcatggccactttgatctggcttcttatgagaagtatttgcaggga
agtttagttgatttatcatttgaagaggagaaaattaaagaatcattggccaaagttcct
caagtgcaggcatag
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