Gossypium hirsutum (upland cotton): 107895829
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Entry
107895829 CDS
T04793
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00040
Pentose and glucuronate interconversions
ghi01100
Metabolic pathways
Module
ghi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107895829
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
107895829
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Motif
Pfam:
Glyco_hydro_28
NosD
Motif
Other DBs
NCBI-GeneID:
107895829
NCBI-ProteinID:
XP_016676536
UniProt:
A0A1U8IEB4
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Position
A07:complement(13493762..13494887)
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AA seq
221 aa
AA seq
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MVIESLYREISGCKNITFEHFTVSAPGESPNTDGIHIGRSDGVNVLNTEIKTGDDCVSIG
DGSKNLVINGVNCGPGHGISIGRLGLFKNEEPVDGVTVKNCTLTNTSNGVRIKSWPGAEP
CTCSNIHFEDITVTNEEPKVKLSNISFKNIHGTSALPEAVKIICRATLPYENVELANIQI
TLSGPTGPAVSQCSNVKPKVSGKKNPAACSAPIAAKPTPAA
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggtcattgagtctctgtacagggagatatctggatgtaaaaacattactttcgaacat
ttcaccgtatctgcacctggagaaagcccaaacacagatgggattcacatcgggagatca
gatggggttaatgttcttaacacagagataaaaactggtgatgattgtgtttcaattggg
gatggttccaaaaatttggttatcaatggagtaaattgtggaccaggacatggtatcagt
attggtcgtcttggattgtttaaaaatgaagaacccgttgatggagttacagtaaaaaat
tgcaccttgactaatacttcaaatggtgttagaatcaaaagttggccaggtgctgaaccc
tgcacttgttcaaacattcactttgaggatattaccgtgaccaatgaagaaccaaaagtt
aagctaagcaacattagtttcaaaaacattcacggcacttcggcacttccagaagctgtc
aagattatttgcagagctactttgccgtatgaaaatgtggaacttgccaacattcaaatt
acgctcagtggaccgactggacctgcagtatcacaatgttcgaatgtgaagcctaaagtt
agtggtaaaaaaaatccagctgcatgttccgcccctatcgcagcaaaacctaccccggcc
gcttaa
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