Gossypium hirsutum (upland cotton): 107896574
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Entry
107896574 CDS
T04793
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107896574
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
107896574
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_WDR41
Beta-prop_HPS5
TFIIIC_delta
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_ELP1_2nd
Motif
Other DBs
NCBI-GeneID:
107896574
NCBI-ProteinID:
XP_016677260
UniProt:
A0A1U8IGM9
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Position
A10:102993993..103000704
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AA seq
838 aa
AA seq
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MSINNSKTEVKRLFIGAGCNRIVNNVSWGASDLVSFGAQNAVVIFCPKSAQILTTLPGHK
AVVNCTHWLPSNKFAFKAKQLERHYLLSGDADGVIILWELSLADNKWRHVLQLPKSHKKG
VTCITGFMVSQTDAIFATSSSDGTVFVWDVVFPTSSGCECKLSCLETLVVGSRPMVTLSL
VQLPGNTGLIALAMGGLDNKIYLYCGERTGKFVRACELKGHTDWIRSLDFSLPIFSGEVD
SVLLVSSSQDKGIRIWKLTLRGSLANIEGTYKRGEIGLASYIEGPVFVAGSFSYQISLES
LLIGHEDWVYSVQWQPPSLAAEEDIGFYQPQSILSASMDKTMMIWQPERKTGIWMNVVTV
GELSHCALGFYGGHWSPDARSILAHGYGGSFHMWKNIGVSSDNWQPQKVPSGHFAAVTDI
AWARCGNLLSVSHDQTTRIFASWHNRDPQSDGDSWNEIARPQVHGHDINCATVIQGKGNH
RFVSGAEEKVARVFEAPLSFLKTLHYATSEQSSFPEDVQADVQVLGANMSALGLSQKPIY
VNATHEIQENLGNDGLDTLESVPDAVPVALTEPPIEDQLAWHTLWPESHKLYGHGNELFS
LCCDHEGKLVASSCKAQSATVAEIWLWQVGSWKAVGRLQSHSLTVTQMEFSHDDNLLLAV
SRDRQFSTFKINRAGNDEIDYKLVARQEAHKRIIWACSWNPFGHEFATGSRDKTVKIWGV
EKTSSVKPLLTLPQFDSSVTALSWVGLDRQRNDGLLAVGMESGLLQIWSLHVERSDDSIP
TPGVATAQIIRLDPFMCHVSAVNRLAWKNPENNENSANLQLASCGADHCVRLYEVIVH
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtctattaacaacagtaaaacagaagtaaagaggttgtttataggggctggttgcaac
agaatagtgaacaacgtttcatggggtgcttctgatttggtctcctttggtgcccaaaac
gccgttgttattttctgtcccaagtctgctcagatcttgactacacttccgggtcataag
gcagttgttaattgcactcattggcttccaagtaataagtttgcattcaaagctaaacaa
ttagagcggcattatctactatctggagatgctgatggtgttattatcctatgggaactt
tctcttgctgacaataagtggaggcatgttttacaattgccaaaatcacataagaagggc
gtaacatgcattactggatttatggtttctcaaactgatgcaatatttgctacatcttct
tctgatggcaccgttttcgtatgggatgttgtgtttccaacttcttctggctgtgaatgt
aaattatcatgtctggaaactctagttgttggctcaagaccaatggtaacactttcactt
gtgcaactgcctggaaatacggggcttatagccctggcaatgggaggattggataacaag
atttatctttattgtggggagaggaccggaaagttcgtacgcgcatgtgaactaaaaggg
catacggattggatcaggagtttagacttctcgttacctatattcagtggtgaagtcgat
agtgttctacttgtaagttcatctcaggacaaaggtatacgcatatggaagttgactctc
cgaggttctctagccaatatagagggtacatataaaagaggtgaaataggtctggcatct
tacattgaaggtcctgtttttgtcgctggctcattctcttaccaaatatctttggaatct
cttctgattggacatgaggattgggtatattcggtacagtggcaaccaccttcactggca
gctgaggaagatattggcttctatcaaccccaaagcattttgtctgcatcaatggataag
actatgatgatctggcaacctgagaggaaaactggtatttggatgaatgtggtcactgtt
ggggaattaagtcattgtgctttaggcttttatggtggtcattggagcccagatgcacgt
tctatcttggcacacgggtatggtggctcattccatatgtggaaaaatattggtgttagc
tcagataattggcaaccacagaaagtaccttctgggcattttgcagcagtgacagatatt
gcttgggcaaggtgtggtaacctgctgtcagtaagtcatgatcagacaactcgtattttt
gcttcatggcacaatcgagatcctcagagtgatggggactcctggaatgaaattgcccga
cctcaagtacatgggcatgatattaattgtgcaactgtcattcaaggaaaagggaaccat
cgatttgtcagtggagcagaggagaaagttgccagagtgtttgaagcccctttatccttc
ttaaagacactgcattatgctacttcagaacagtcaagttttcctgaagatgtccaagca
gatgttcaggtcttgggtgccaatatgtctgctcttggtctatcacagaaacctatatat
gtaaatgcaactcatgagatccaagagaatcttggaaatgatggtcttgacactcttgaa
tctgttcctgatgctgttccagtcgctttaactgaacctcctattgaggatcaacttgca
tggcatacactatggccagaatcacacaaactctatggacatggaaatgaactgttttcc
ttatgctgtgatcatgagggaaagcttgttgcttcatcatgtaaggcccaatcagcaaca
gtagcagaaatatggttatggcaagtgggttcatggaaagctgttggtcgcttgcagtct
cacagcttaacagtcacgcagatggagttctctcatgatgacaaccttcttttggcagtc
tcaagggatcgccagttctccactttcaaaatcaatagagcaggcaatgatgaaattgat
tacaagcttgtagctcggcaggaggctcataaaagaataatatgggcatgttcgtggaac
ccttttggtcatgaatttgcgacaggttctagggacaagacagtgaagatctggggtgtg
gagaaaacatcttcggttaagccacttttaactttaccgcagttcgacagtagtgtcact
gccctgtcttgggttggtcttgaccgacaaagaaatgatgggcttcttgcagtgggaatg
gagagtggactccttcaaatttggagccttcatgttgaaagaagtgatgatagcattcca
acaccaggtgtggccactgctcagatcatacggcttgatcctttcatgtgtcatgtttct
gcagttaaccgtttggcgtggaagaaccctgagaacaatgaaaatagcgcaaacctgcag
cttgcttcttgcggagctgatcattgtgtgaggttgtatgaggtaatcgttcactaa
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integrated database retrieval system
