Gossypium hirsutum (upland cotton): 107896582
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Entry
107896582 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6 isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107896582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107896582
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107896582
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
HECT type E3
107896582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
107896582
NCBI-ProteinID:
XP_016677269
UniProt:
A0A1U8IN87
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Position
A10:102394607..102410383
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AA seq
1032 aa
AA seq
DB search
MFFTGDPTSRKRVDLGGRSSKERDRQKLLEQTRLERNRRLWLRRQNSAALTIQKYFRGRK
VVEAEHAKVREHFYQTYGKHCQNVDRHCFGPDSEFLRQLIFFFDAHNLNDFSVLVETCRL
IQNFVRDSGDTVGLFAGMDYSPSHSLVAYRLKRLSFACIQAIHQNRKQLKDQLLMAPEEA
TASTTILLQTLFLFLDPKLPWACKAVGYLMQRNVFFLFREVILMVKENISAGGSFGKIYT
LERVLALMISHVGQSTCVCSNVDSQWSFSSQILTIPFIWQLFPYLKVVFASWRLTLHYTN
KMVLCVQNHASLLPTDISNKFPVYACLLGNILETAGAALSQPDCSFEMAMDLAAVTTFLL
DALPPIKSSSRESPTVAEDDMIIGDEIEEIVLDSNLEQQITNAIDSCFLLQLTNVLFGGI
SAACDPHNEGPDDKEVAAITAACAFLHVTFNTLPLERIMTVLAYRTELVPVLWNFIKRCH
HNQKWSPLPERFSYLLGDAPGWLLPLAVFCPVYKHMLMIVDNEEFYEQEKPLSLKDVRCL
IVILRQALWQLLWVIPSVHPTYGKSISNTSAHKRQLVETIQNRVGTVVSELLSQLQDWNN
RRQFTPPSDFHADGVNDFFISQAAVEGSKAHDILKQAPFLIPFTSRVKIFTSQLASVRQR
HGAHGVFTRNRFRIRRDHILEDAYNQMSQLSEEDLRGLIRVTFVNEFGVEEAGIDGGGIF
KDFMENITRAAFDVQYGLFKGTADHLLYPNPGSGMIHEQHLQFFHFLGTLLAKAMFEGIL
VDIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYKGDISGLELYFVIVNNEYGE
QTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLMQKDWIDMFN
EHELQLLISGSLDSLDVDDLRCHTNYAGGYHSEHYVIDMFWEVLKSFSLENQKKFLKFVT
GCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLPPYRSKEQLEAKLM
YAINADAGFDLS
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcaccggtgatccgaccagtcggaagcgagttgatttgggtggtcggagctca
aaggagagagataggcagaaacttctagaacaaacgcgattggagcggaatcgccgcctc
tggttgcgtcgccagaattccgcagctctcacgattcagaaatacttcagagggagaaag
gttgtggaagctgaacatgccaaggtccgagagcacttctaccaaacctatggaaagcac
tgccaaaatgtagataggcattgttttggtccagactcagagtttctccgccagctaatt
ttcttctttgatgcccacaatttaaatgatttttcagttcttgttgagacttgccgatta
attcagaattttgttcgagatagcggggatactgttgggctctttgcaggtatggactat
tcacccagtcattctttagttgcctacagactgaagcggctctcatttgcttgtattcag
gctatacatcagaacagaaaacaattgaaagatcaactgttgatggctcctgaggaggcc
actgcatcaacaaccatcttgcttcaaacattgtttttgtttttagatcctaaactgcct
tgggcatgtaaggcagttggttatctcatgcaaagaaatgtattctttctgtttagagaa
gttattctaatggtaaaggaaaatataagtgctggaggttcttttgggaaaatatataca
ttggagcgtgtgcttgctcttatgatttctcatgttggtcagagcacatgtgtttgctca
aatgtggattcacagtggagtttctcatcccagattcttacaatccctttcatatggcaa
ctttttccatacttaaaagtggtttttgcttcttggagattaactctgcactacactaat
aagatggtcttgtgtgtgcaaaaccacgctagtttacttcccactgatatatcaaataag
tttcctgtttatgcctgcctccttggtaatattttagaaacagcaggtgctgctttatct
cagcctgactgctcatttgaaatggccatggaccttgcagctgttacaactttcttgttg
gatgctcttcctcctataaaatcatcaagcagagaaagtcctacagttgcagaggatgat
atgatcataggtgatgaaatagaggaaatagttttggatagtaatttggagcagcagata
actaatgctattgattcatgctttctgctgcaattgactaatgtgttgtttggagggatt
tccgctgcctgtgatccacataatgaaggaccagatgataaggaggtggcagccattact
gctgcttgtgcttttctgcatgttactttcaatactttacctctagagagaatcatgacc
gtactggcctatagaactgaacttgttccagtgctttggaattttattaagcgatgtcat
cataatcaaaagtggtcacccttgcctgagcgtttttcatatctcttgggagatgcacct
ggttggctgctacctctggctgttttctgtccagtgtataagcacatgcttatgatagtt
gataatgaggagttttatgagcaggagaagccattgtctttgaaggatgtcagatgccta
attgtcattctgagacaggcgttatggcagctcctatgggtgattccttctgttcaccct
acctatgggaaatctatctccaatacttctgctcataagaggcaacttgttgaaactatt
caaaatagggttggtactgtggtctcagagctcctatcccagttgcaagattggaataac
cggcggcaatttactccgcccagtgactttcatgctgatggtgtaaatgacttttttatt
tctcaggctgcggtggaaggcagcaaagcacatgacatattgaagcaagcaccttttttg
attccattcaccagcagagttaaaatattcacttctcaactagcatcagttaggcagaga
catggggctcatggagtttttaccaggaaccgattcagaatacgaagggatcatatttta
gaagatgcttataatcagatgagtcaattgtctgaggaggatcttagaggactgattcga
gtaacatttgtcaatgagtttggggtggaggaggctggcattgatggtggtggaattttc
aaagattttatggagaatattactcgggctgcatttgatgtgcaatatgggttatttaag
ggaacagctgatcacctcctatatccaaatcctggatctgggatgatacatgaacagcat
ctccaatttttccatttcttgggaacactacttgcaaaggccatgtttgaagggattctt
gtggatataccatttgcgacattcttcttgagcaaattgaaacaaaagtacaattattta
aatgacttgccttctttggatccagaattatatcgccaccttattttcttaaagcattat
aaaggggacatatcagggttggagctctactttgtaattgtgaataatgaatacggcgaa
caaacagaagaagagctgcttccaggaggcaaaaacatacgtgttacaaatgagaatgtg
atcacatttattcaccttgtatctaaccaccgtttgaattttcagatacgtcagcaaagt
tctcatttccttaggggatttcagcagcttatgcagaaagattggattgatatgttcaat
gaacatgaattgcagcttctgatttcaggttcccttgatagcttggatgttgatgacctt
cgatgccacaccaattacgctggtggttatcatagcgagcattatgtcattgatatgttt
tgggaagtcctcaaaagcttttcactggaaaatcaaaagaaatttttgaagtttgtgact
gggtgttcccgaggacctttgctgggattcaaatatctcgaacctttattttgcatacaa
agagctgctggaagtgcctctgaagaagcattggaccgattaccaacatcagctacttgt
atgaaccttctaaagcttccaccatatagaagcaaagagcaactggaagccaaattgatg
tatgcaataaatgcagatgcgggttttgatttgagttga
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