Gossypium hirsutum (upland cotton): 107896635
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Entry
107896635 CDS
T04793
Name
(RefSeq) transcription initiation factor TFIID subunit 11 isoform X3
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107896635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107896635
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107896635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
T3SS_basalb_I
Motif
Other DBs
NCBI-GeneID:
107896635
NCBI-ProteinID:
XP_016677326
UniProt:
A0A1U8IGQ4
LinkDB
All DBs
Position
A10:98924528..98930421
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AA seq
228 aa
AA seq
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MKQSKDPFEAALEEQEESPPNSPVGEDELNSQTPNEPQNQTNGGHNLLVDDDDYDEIGPN
VKNSSHPSSTSTCKLHSTIVNANVATGATTKNKEYDDDEEEENMEVELSKFPSSADPTKM
AKMQAILSQFTEDQMSRYESFRRSALQRSNMRRLLVSITGSQKISLPMTIVVCGIAKMFV
GELVEKARIVMTERKESGPIRPCHIREAYRRLKIEGKVPKRSVQRLFR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaatcaaaggatccattcgaagcagcattggaggagcaagaggaatcgccgcct
aattccccagttggtgaggatgagctgaacagccaaactccaaatgaaccccagaaccaa
accaatggtggacacaatttgcttgtagatgatgatgattacgatgaaattggtcccaac
gtaaaaaattcctctcatccatcatcaacttcaacttgtaagttgcactctacaattgtt
aatgctaatgttgctactggagccaccaccaagaacaaagaatacgatgatgacgaagag
gaggaaaacatggaagttgagcttagcaagttcccttctagtgctgaccctactaaaatg
gccaagatgcaagccattttatcgcaattcacagaggatcagatgagtagatatgaatca
tttaggagatctgcgcttcaaaggtctaacatgagaaggttgttggtaagcataactggc
agccagaaaatttctttaccaatgaccattgtcgtgtgtggtatagcgaaaatgttcgtc
ggtgaactcgttgagaaagctagaatagtcatgacagagagaaaagaatccggaccaatc
aggccttgccacattagagaagcttatagaagattgaagattgaaggcaaagtgcctaag
agatcagtgcaaaggctgtttcgctaa
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