Gossypium hirsutum (upland cotton): 107896640
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Entry
107896640 CDS
T04793
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3 isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107896640
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107896640
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107896640
04121 Ubiquitin system [BR:
ghi04121
]
107896640
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107896640
Peptidases and inhibitors [BR:
ghi01002
]
Metallo peptidases
Family M67
107896640
Membrane trafficking [BR:
ghi04131
]
Endosome - Lysosome transport
Others
Others
107896640
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
107896640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
ZnuA
Motif
Other DBs
NCBI-GeneID:
107896640
NCBI-ProteinID:
XP_016677341
UniProt:
A0A1U8IGX4
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All DBs
Position
A10:98714068..98719106
Genome browser
AA seq
507 aa
AA seq
DB search
MKLDVNAMARRVEVDNRIPLRYYYRIADSLLKQANIYREEKNIVDLYIILLRYSSLVSET
IPFHRDYQALLPKEKAVYRKRLLAVLDELESLKPEVQQRVEELNKARTGAQLVDLDDHEG
PFHGSGKMSPSDWNPENRRLNMSLDIKQPANMEVQSSWKYNDNHNQIDRQFQKLSLNIPL
PNKETLSRHSFLGPNGFHGQWLGPSAEIKVQYPSNKDLAPAENSSLNQAGQYGPLAVIDG
EPGGVGSAMDSVLSLDDGRWLHPAEESCTSLTSEANQDLFQFVGMKQPSPPPVIAQVKPE
FTPIHPSKVADPRPGPAKSSQDGLPNSSSFQHLHVPVQMLEDFLRLAQANTEKNLETCGV
LAGSLKNRVFHITTLIIPKQESTSDSCSTLNEEEIFEVQDKLSLFPLGWIHTHPTQTCFM
SSVDLHTHYSYQIMLPEAIAIVMAPTDMSSPHGIFHLSDPGGVSVIRNCQQRGFHPHEEP
SDGTPIYEHCSHVFMNPKIKFDVVDLR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgacgtcaatgcgatggctcgtagagtcgaagtcgataatcgaattccactc
cggtattattatcgaatcgccgatagtctcctcaaacaggcgaacatttatcgtgaggaa
aaaaatatagtagatttgtacataattctgcttaggtattcaagtttggtatcagaaaca
ataccattccatcgagattaccaggctttgcttccgaaagaaaaggcggtgtataggaag
agacttttagctgtactcgatgagcttgagtctctaaaaccagaggttcaacagagagtt
gaagaactaaataaagctcgtacaggggctcaattggttgaccttgatgaccatgaaggc
cctttccatggctcaggtaagatgtcaccttcggattggaaccctgaaaatagacggttg
aatatgagcttggatattaaacagcctgccaacatggaagttcaatcttcatggaagtat
aacgataatcataatcagattgacaggcagtttcagaagttgtctcttaatataccgctt
ccaaataaagaaactctgtctagacactcatttctaggccctaacggctttcatggccag
tggctcggaccaagtgcagagataaaggttcaatatcctagcaataaggacttggcacct
gctgaaaattcaagcctgaatcaggctggacaatatggtcctttggctgtaatagatggt
gaaccaggaggggttggttctgctatggactcggtactctcgttggatgatggtcgatgg
ttacatcctgctgaagagtcatgtacttctttgactagtgaagcaaaccaggatcttttc
cagtttgttggtatgaaacaaccttctcctcctcctgttattgctcaagtaaagccagaa
tttacaccaattcatccatcaaaagttgctgatccaagacctggtcctgcaaaatcttct
caagatggattgccaaactctagttcattccaacatttacatgttccagtacaaatgttg
gaggatttcttacgactggctcaggccaatacagaaaagaacttggaaacatgtggtgtc
ttagctggatcattgaaaaacagggttttccacatcactacacttataattccaaagcag
gagtcaacttcagattcgtgttcgacattaaatgaagaagaaatttttgaagttcaagat
aaattatctctttttcctctgggatggattcatacgcacccaactcagacatgttttatg
tcatcagttgatcttcacacacattactcgtaccagattatgctaccggaagcaattgca
attgttatggccccaactgacatgtccagcccacatggtatctttcatctgtctgatcct
ggtggtgtgtctgttatccgtaactgccagcagcgaggattccatccccatgaggaacct
tcagatggaaccccaatctatgagcattgctctcatgtgtttatgaatcccaagataaag
tttgatgttgttgatctccggtga
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