Gossypium hirsutum (upland cotton): 107896687
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Entry
107896687 CDS
T04793
Name
(RefSeq) condensin-2 complex subunit D3
KO
K11491
condensin-2 complex subunit D3
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107896687
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
107896687
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cnd1
PDS5
Cnd3
Arm_3
Motif
Other DBs
NCBI-GeneID:
107896687
NCBI-ProteinID:
XP_040935013
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All DBs
Position
A10:96377315..96383096
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AA seq
1342 aa
AA seq
DB search
MEETIARILTELEEINQIPNIQNQTPLISRSTLLDLHSLLSTNDPDLVSQLFDDLPSKSL
SPSSLTNLLSFTMDSAHSYSLLASKVYLSLLLSPNSPVFTLFTPISFLSFLRSLRRSFKN
CPSAQPEESPPSNAPPNRKRKGGGRGRGARGNVRGSGDCSEEASDTFDMKQVFKVFEMLV
SVLGLIHLDRFPDSLKSLIQTFGEIPLMAMEKLGNPSSLNRLMDLCSRVLSEVLRSEHGE
LANTAAEVLKALSPLILMVKSQARSFALGFVTKRMTELGNESDGVKKAVVNFPRYLAQKA
PEKAEPRALAVDSIMEVVKVMDFEDQIGYMDYVLKMTQGKANLRLLGVDLIAMMLMSLRD
PFGVVSDVKTRDYWGTRCLEALITRCSDLSAGIRARALSSLAQVVGFLSIDDRNKGILKE
VMRLSEGGEERPLCGMNDLLKNRCMDDKAAVRKAALLLVTKLISLLDGCFGGILLKTVGM
ACSDPLVSIRKAAISALSEAFRTFSDESVTTEWLHSVPRLITDNESSIQEECENLFLELV
LDRVSRAGPACAPKKGSVSPESYLTTKSLEGELELLFPEGILILLKGICDGEVTPWVKKL
CTSLGKKKRLKPKIAAALQNIIKTSESIWLSHSMPIEKWTAPAGAWFLLSEVSVYLSKAV
EWEFLHHHWQLLDKPGSKGKLQSPLLQGNANEDGEGVESNSVAWAGDRVFLLQTISNVSM
ELPAEPAADLAHNLLKRVEKFNMHSTEVNAHVKALRTLCKVKSLNPVEADQLVMRWGQQL
LSKAHEILEKYISDDKEANNNNSFFTPPRSGSRKGKQAARASRLLSKTVTAVYTVGSLVV
VCPAADVSSIVPLLYTVVTSGNSDPKLNKLPGPKVSLKQTAPSLYIQAWLTLGKICLADG
KLAKSYIPLFVQELEKSDCAALCNNLVVMMADFCVRYTALVDCYIAKITKCLRDPCELVR
RQTFILLSRLLQRDYVKWRGVLFLRFLLCLVDDSGKIRQLADFLFGNILKAKAPLLAYNS
FIEAIYVLNDCHAHNGHNDSKNSRTESRLFSIRGNDERSRAKRMRIYVCLLKQMAPEHLL
ATFAKLCAEILAAASDGMLNIDDITGQSVLQDAFQILACKEIRVSSHRGAASDSAEVEED
GDSSASAAAAKGRAITQAVRKGLIQNTIPIFIELKRLLENKNSPLTGSLMECLRVLLKDY
KNEIDDMLVADKQLQKELIYDIQKYESAKARTTAAEAVAGMQNQGVYRSPPCVPKAATGA
DPENKMNQKLSSDSKVASAIADAAAEATARSVLREVNKGAMTPPLKAINVPKLKSNQAGS
SAKNDRSLDVLESLRRRIDDEN
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaccattgcaagaatcctcacagagcttgaagaaatcaatcaaatcccaaat
atccaaaaccaaactccactcatatctcgatctactttgttagatcttcattcccttttg
tccacaaacgacccagaccttgtttcccaactcttcgatgacctcccttccaaaagcctc
tctccttcttccctcaccaacttgttgtctttcacaatggattctgcccattcctattct
cttctagcttccaaagtttacctctctcttctcctttcccctaattcccccgttttcact
ctctttaccccaatttccttcctttctttccttcgttccctccgtcgctccttcaaaaac
tgtccatcggcccaacctgaggagtcccccccttccaacgcgccgcctaatcggaagagg
aaaggtggggggaggggtcgtggagcacgtggtaacgttagaggttcgggagattgtagt
gaggaagcaagtgatacttttgatatgaaacaagtctttaaagtgtttgaaatgttggtt
tctgttttgggtttgattcatttggataggtttccggatagtttgaaatctttgatacaa
acttttggtgaaattcctttgatggcaatggaaaagcttgggaatcctagtagtttgaat
cggttaatggatttgtgttcacgggttttgagtgaagtgttgaggtctgagcatggagag
ttggctaatactgcagctgaggtcttgaaagctttatcgccattaatattaatggttaag
tcgcaagcaagaagtttcgctttggggtttgtcacaaaaaggatgacggaattgggaaac
gagagtgatggtgttaagaaagctgtcgttaattttcctagatatttggctcaaaaggca
cctgagaaggctgagccacgggctttggctgtggactccataatggaggttgttaaagtg
atggattttgaggatcaaataggatatatggactatgtgttgaagatgactcaagggaaa
gctaatcttaggctgttaggtgttgatcttattgcaatgatgttaatgtcattgagggat
ccttttggggtggtttcggatgttaaaaccagggattattggggtacaaggtgcctggaa
gctttgattactagatgttcggatttgagtgctggaattcgtgctcgagctctatcaagc
ttggcacaagttgtggggtttttgtctattgatgataggaataaaggcattttgaaggaa
gtaatgcggttatccgaaggtggagaggagaggccactgtgtggaatgaatgatcttttg
aagaataggtgtatggatgacaaggcagctgttaggaaggcagcacttcttctggttact
aagttgatatcccttttagatggttgttttggtggaatcctgctcaagacggtgggtatg
gcttgctcggatccacttgttagcatacgtaaagctgccatttcagctctttctgaggca
ttcagaacattttcagatgaaagtgtgactactgagtggctacattctgttccacgttta
ataacagataatgaatctagcattcaagaagaatgtgaaaatttgttcttggaattggtt
ttggaccgggtgtcaagagccggaccggcttgcgcacccaagaaaggatctgtttcgcct
gagtcatatctaacaacaaagagtttagaaggggagttggagttattattccctgaaggg
atattgattcttttgaaaggcatctgtgatggtgaggtgactccatgggtgaagaagctt
tgcacaagcctcggtaaaaagaaacggttgaagcccaagattgctgctgctcttcaaaat
attataaagacttctgaatctatctggttgagtcattccatgccaattgagaagtggaca
gctccagctggtgcttggtttcttctatcggaagtctcagtatatctttcaaaagctgtt
gagtgggagttccttcatcaccattggcaactactagacaaacctggttcaaaaggcaag
ttacaaagcccacttttgcaaggaaatgcaaatgaagatggagagggcgtagaatccaat
tcagttgcatgggcaggagatcgtgttttcctcttgcaaaccatctcaaatgtttccatg
gaattgcctgctgaacctgctgcagatttagcccacaatttgcttaaaagagttgaaaag
ttcaacatgcattccacagaggttaatgctcatgtaaaagctctcagaacattgtgcaag
gtaaagtcattaaatcctgtggaggctgatcaacttgttatgagatggggacagcagctt
ctctctaaagcacatgaaattttagaaaagtacatttctgatgataaagaagcaaataac
aataatagtttctttacaccaccaagaagtgggagcagaaaagggaagcaagcagcaaga
gcatccaggttattatcaaaaacagtcactgcggtctatactgttgggtctttggttgtt
gtctgtcctgctgcggatgtgagctcgattgttccactattatacacagtcgtaacttca
gggaattctgatccgaagttaaataaattaccagggcctaaggtatctttgaagcagaca
gccccttctttgtacattcaagcatggttgacattggggaaaatttgcctcgctgacggg
aagcttgcaaaaagctacattcctctctttgtgcaggaacttgaaaagagtgattgtgct
gccctttgcaacaatcttgtagtgatgatggcagatttctgtgtccgctatactgctctg
gttgattgttacatagctaagatcaccaagtgtcttcgtgatccatgcgagcttgttaga
cgacagacttttatattgctctcaagattattacaaagggactatgtgaagtggagggga
gtgctattccttcgtttccttctatgtcttgttgatgactccggaaaaataagacaactt
gctgattttctctttggaaatattttgaaagccaaggctccacttcttgcatacaacagt
ttcattgaagccatttatgtactgaatgactgccatgcacacaacggacataatgattcc
aagaattcacggacagagagtcgacttttttccatcaggggtaatgatgagaggtcgagg
gctaaacggatgcggatctatgtgtgcttgctgaaacaaatggcaccggagcaccttttg
gcgacatttgcaaagttatgtgctgagattctagcagctgcatcagatggtatgctcaat
atagatgatataactggacagtctgttcttcaggatgctttccagattcttgcctgcaaa
gagatccgagtctcatcccatcgtggagctgcatccgattcagcagaggtagaggaagat
ggtgatagcagcgcatctgcagctgctgcaaaaggaagggctataacacaagctgtgaga
aagggtcttattcaaaacactatcccaatttttatagagctaaaacggctactagaaaac
aagaacagccctctcacaggttccctcatggaatgcctgcgagtccttctcaaggactac
aaaaacgagatcgatgacatgttggttgcagataaacagcttcaaaaagagcttatatat
gacatacagaaatatgagtcagcaaaggctcgaacaacagctgcagaagcagttgcaggc
atgcaaaaccaaggtgtctatcgatcaccaccttgcgttccgaaagctgcaactggagct
gatcctgaaaacaagatgaaccagaagttgtcaagtgattcgaaagtggcatcagcaata
gcagatgcagctgcggaagccaccgcccggtccgtgctaagggaggtgaacaaaggagca
atgaccccaccacttaaggccattaatgtgccaaagctcaagtctaaccaggcaggaagc
tctgctaaaaatgatcgctccttagatgtattggaatccttgaggagacgaattgatgat
gagaactga
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