Gossypium hirsutum (upland cotton): 107896738
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Entry
107896738 CDS
T04793
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107896738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107896738
03036 Chromosome and associated proteins [BR:
ghi03036
]
107896738
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
107896738
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
107896738
RSF complex
107896738
WICH complex
107896738
B-WICH complex
107896738
NORC complex
107896738
BRF complex
107896738
NuRF complex (fruit fly)
107896738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
Myb_DNA-binding
HAND
DEAD
HDA2-3
DBINO
ToxN_toxin
AAA_14
Motif
Other DBs
NCBI-GeneID:
107896738
NCBI-ProteinID:
XP_040934980
UniProt:
A0A1U8IH40
LinkDB
All DBs
Position
A10:93869546..93876040
Genome browser
AA seq
1058 aa
AA seq
DB search
MAKSSKPASSDEVLSNGSNSSEDERINDRMEEDDDDEELEAVACSDAASDEDDEPVPEEI
ADQDESNGDDPEVSKREKERLKEMQKLKKQKVQEILDAQNAAIDADMNNRGKGRLKYLLQ
QTELFAHFAKGDQSSSQKKVKGRGRHASKVTEEEEDEECLKEEEDGLSGNTRLVAQPSCI
QGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLHEYRGITGPHMVVA
PKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRYIREELLVAGKFDVCVTSFEMAIKEKSA
LRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLLP
EIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGM
SQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHL
ITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGEDR
DASIESFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQ
KKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFGAEM
VFSSKDSTITDEDIDRIIAKGEAATAELDAKMKKFTEDAIKFKMDDTAELYDFDDDKDEN
KFDFKKIVSENWIEPPKRERKRNYSESEYFKQTMRQSAPAKPKEPRIPRMPQLHDFQFFN
TQRLSELYEKEVRYLMQTHQKNQVKDTIDVDEPEGGDPLTAEELEEKERLLEEGFSSWSR
RDFNTFIRACEKYGRNDIKSIASEMEGKTDQEVERYAKVFKERFKELNDYDRIIKNIERG
EARISRKDEIMKAIGKKLDRYKNPWLEMKIQYGQNKGKLYNEECDRFMVCMVHKLGYGNW
EELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQECDERERQARKEKKLAK
NITPSKRGGRQPTESPTQQKKRKQLSMDDYANSGKKRK
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcgtcgaagccggcgtcgtctgatgaagtcctatccaacggctccaattct
tctgaagatgagcgaatcaacgaccggatggaggaagacgacgacgacgaagagctcgaa
gccgttgcatgctccgacgccgcttccgacgaagacgatgaacccgtccctgaagaaatc
gccgatcaggacgagtctaacggtgatgatccagaagttagtaagcgtgaaaaggaaagg
ttaaaagaaatgcagaagctaaagaagcagaaggttcaggaaatattggacgctcagaat
gctgccattgatgccgatatgaataatagggggaaggggcgtttgaagtatcttttgcag
caaaccgagttgtttgctcattttgctaaaggtgaccaatcttcatcacaaaagaaggtg
aaaggaaggggccgtcatgcttcaaaagtaactgaagaggaagaagatgaagagtgtttg
aaggaggaagaagatggtttgtctggaaatactagattggtggctcagccttcttgtatt
cagggaaagatgagggactaccaacttgctggtttaaattggcttatacgactgtatgag
aatggtatcaacggaattctagcagatgaaatgggattgggaaaaactttgcaaaccatt
tccttaatgggctatctgcatgaataccgtgggattactggccctcatatggttgttgct
ccaaaatcaactcttggtaactggatgaatgaaattcgtcggttttgcccagtcttgcga
gctgtaaagtttcttgggaatcctgaggaacgaagatacatccgtgaggagttactggtt
gctgggaagtttgatgtctgtgtcacaagttttgaaatggccatcaaggagaagtctgcc
ttgcgtcgttttagttggcgctatataattattgatgaagcccatcgaatcaagaatgag
aattcactcctttcaaaaacaatgagactctacaatactaattaccgtcttcttattacg
ggtactccacttcagaataatctccatgagctttggtctcttcttaactttttattgccg
gagatttttagttcagctgaaacctttgatgagtggttccagatttctggtgaaaatgat
cagcaggaagtcgttcaacaacttcacaaggttcttcgtccatttctccttcgtagattg
aaatcagatgttgaaaaaggtttgcctcccaagaaggaaactatcctgaaagtaggaatg
tcccagatgcagaaacagtactatagggctttgttgcaaaaagatcttgaagttgttaat
gctggtggagagcgtaagcgtcttctgaacattgcaatgcagctgcgcaaatgctgtaat
cacccatatcttttccaaggtgctgaacctggacctccatatactacaggggaccatctt
ataaccaatgccggcaaaatggttctcttggacaagttacttccaaagctgaaggaacgt
gattctcgagttctgatattttcacagatgacaaggctgctggatattcttgaagattat
ttgatgtttcgcgggtacctgtattgccggattgatggtaatacaggtggagaagatcgt
gatgcgtccattgaatcctttaataagcctggaagtgagaaatttgttttcttgttatca
actagagctggaggccttggtattaaccttgctacagcagatgttgtcattctttacgat
agtgactggaacccacaagttgatttgcaagcacaagatcgtgctcataggattggtcaa
aagaaagaagttcaagtgttccgcttttgcacagagtatactattgaggaaaaggtgatt
gagagggcttataaaaagcttgccctagatgctctggttatccaacaaggacgattagca
gagcagaagactgttaacaaggatgagttgcttcaaatggtgaggtttggtgctgaaatg
gtcttcagttccaaggatagcacaatcactgatgaagacattgacagaatcattgccaaa
ggagaagcagcaactgctgaacttgatgccaagatgaagaaatttactgaggatgcaatt
aaatttaagatggatgatactgctgaattgtatgattttgatgatgataaggatgagaac
aagtttgacttcaagaaaattgtaagtgaaaactggattgaaccacctaaaagagagcgg
aagcggaattactcagaatctgagtacttcaaacaaaccatgcgccagtcagctccagca
aaaccaaaggagcctcgtattcctcgcatgcctcaactgcatgatttccaattttttaac
actcagaggctaagtgagttgtatgagaaagaagtacgctatctcatgcaaacacatcag
aagaatcaggtaaaggacacaattgatgtggatgaacctgaagggggagatccattaacc
gctgaagagttggaagaaaaggagagactactagaagagggattttcttcatggagtaga
agagatttcaatacattcattagagcttgtgagaagtatggacggaatgatataaaaagt
attgcttcagaaatggaagggaaaacggatcaagaagttgaaagatatgctaaagttttt
aaggaacgcttcaaggagttaaatgattatgataggataattaagaacattgaacgagga
gaggctagaatttccagaaaagatgagatcatgaaggcaattggcaaaaaattggatcgg
tacaagaatccctggctggaaatgaagatccagtatggtcagaacaaagggaagctgtac
aatgaagaatgtgatcgattcatggtttgcatggttcacaagcttggttatgggaactgg
gaggagttgaaggcagcatttcgtacatcccccttgtttcgatttgattggtttgtgaag
tcgcgaacgactcaagagctggctcggagatgtgataccctcatccgattggttgagaag
gaaaaccaagaatgtgacgagagggagcgacaagcccgcaaggaaaagaaacttgccaag
aacataacaccatcgaagcgcggagggaggcagccaactgagagtcctactcaacaaaag
aaacgcaagcagctatcaatggatgattatgcgaattcgggtaaaaagaggaagtga
DBGET
integrated database retrieval system
