Gossypium hirsutum (upland cotton): 107896850
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Entry
107896850 CDS
T04793
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107896850
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
107896850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
Baculo_LEF5_C
NPIP
Motif
Other DBs
NCBI-GeneID:
107896850
NCBI-ProteinID:
XP_016677635
UniProt:
A0A1U8IHQ7
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Position
A10:complement(88624045..88626973)
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AA seq
364 aa
AA seq
DB search
MERELVDLFEAAKKAADLAAASDAVSEVSRCVDALKQLRAFPVSYDILVSTQVGKRLRSL
SKHPREKIQTVASDLLELWKKVVIEETTKGKKNGTSSAIKSEKLPKPSAVKSEKLSNTEN
VKAEKVSKDNSVKSVKVEKREANGDVAMAKKSDRGEMGKVEKICKDDRQSPNVKKSSQPP
AGPPKLTSMVKCNDLVRDKFREILVEALSKVPSEVDGDMLDQVTACDPIRVAVSVESVMF
EKMGKSNGAQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKPERLITMTPEEMASEQRQREI
NEIKEKALFDCERGVAPKATTDQFKCGRCGQRKTTYYQMQTRSADEPMTTYVTCVNCNNH
WKFC
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggagagggagctggtggatttgttcgaagctgccaagaaagcggctgatttagccgct
gcctccgacgccgtttccgaggtttcccgatgcgtcgatgccttgaagcagctcagggct
ttccctgtctcttacgatattcttgtttctactcaggttgggaaaaggcttcgatctctc
tctaagcatcccagggagaagattcaaactgtggcttctgacttgcttgaactatggaaa
aaggttgttatcgaggagactaccaaaggtaagaaaaatggcaccagtagtgccattaag
tcggagaaacttccaaagccaagtgccgtgaagtctgaaaagctctccaatacagaaaat
gtaaaggctgagaaagtatctaaagataattcagtaaaatctgtcaaagttgagaagagg
gaagcaaatggagatgttgcaatggccaagaagtcagatcggggagagatgggtaaggtt
gaaaagatttgtaaggatgacagacaatcaccgaatgtaaagaaatcatcgcaaccacct
gctggtccaccaaagctgacatcaatggtcaaatgtaacgatcttgtgcgtgacaaattt
agggagattcttgtagaggcgttgtctaaagtcccgagtgaggttgatggggacatgctt
gatcaagtgactgcttgcgatcccatcagagttgctgtgtctgtagaatctgtgatgttt
gagaagatgggtaaatcaaatggggcccagaaatttaagtacagatctataatgttcaac
attaaggatccaaacaacccagatttaaggaggaaggttcttctcggagaagtgaaacca
gaaaggcttattacaatgaccccagaggaaatggcaagtgaacaaaggcaacgtgaaatt
aatgaaattaaagaaaaagctttatttgattgcgagcgaggtgttgcaccaaaggcaacg
acagatcaatttaagtgcggtcgttgtggtcaacgcaagaccacttactatcaaatgcag
acaaggagtgcagatgaacctatgacaacctatgttacgtgtgtcaactgcaacaaccat
tggaaattctgttag
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