Gossypium hirsutum (upland cotton): 107896870
Help
Entry
107896870 CDS
T04793
Name
(RefSeq) protein SHI RELATED SEQUENCE 1
KO
K27807
short internodes/stylish family transcription factor
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107896870
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
107896870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
107896870
NCBI-ProteinID:
XP_016677666
UniProt:
A0A1U8IHV9
LinkDB
All DBs
Position
A11:complement(25794675..25797159)
Genome browser
AA seq
341 aa
AA seq
DB search
MAGFFSLGGRGSNSQEDQRNNPPPTDIQPESWFWYKNEDASFKGFELWQQQEAFQRQYQS
IGNNNNNNQQGQQLQDLYSSAAGLGVGPSRSSINIADDSSSRSAFMMMGGGGGGVSCQDC
GNQAKKDCLHMRCRTCCKSRGFDCQTHVKSTWVPASKRRERQQQLASLQQQQQQLRGENP
KRQRENPTSSPLAFTRLPTNASGLEVGNFPPEVNSEAMFRCVRVSGIEDGDDQYAYQTAV
NIGGHVFKGILYNQGPENGYNMAAAVGESSSGDGIQQLDLITAGPTAAASNAGTVAGNAS
CSSVTAAASSSTVAFLDPSSLYAAPLNTFMAGTQFFPNPRS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcggggtttttttcactaggaggaagagggagcaacagccaagaagaccaacgaaac
aatccaccgccgaccgatatccaacccgagagctggttttggtacaaaaatgaggatgct
tctttcaagggtttcgaattgtggcaacagcaagaagctttccaacgccagtaccaaagc
atcggcaacaacaacaacaacaaccagcaaggccaacagctacaagatctttattcgtca
gcagctggattaggagttggacctagcaggagctcgatcaacatcgctgatgattcctcc
tcgagatcggcttttatgatgatgggtggtggaggtggaggcgtaagttgccaagattgt
ggtaatcaagctaagaaagattgccttcacatgaggtgtagaacctgttgtaaaagccga
ggattcgactgccaaacccatgttaaaagtacttgggttcctgcttccaagcgccgtgaa
agacaacaacaacttgcttctttacagcagcagcaacaacagcttcgtggagagaatccc
aaaagacagcgagagaatccaacatcttctcctcttgccttcactcgtttacccacaaac
gcgtcagggttagaagtggggaattttccgccagaagtgaactctgaagcgatgttccgg
tgcgtgagagtgagtggcattgaagatggtgacgatcagtatgcttatcagacggctgtg
aacatcggagggcatgttttcaagggaattctttacaatcaaggccccgaaaacggctac
aacatggctgcagcagttggtgagagttcttccggcgatggaatccaacaacttgatctt
attactgctggtcccaccgccgccgcttccaacgcgggtaccgtcgcaggcaacgccagt
tgcagcagcgttacagccgctgcgtcttcatcaaccgtcgcatttttagatccttcctct
ctttatgcagctccactcaacactttcatggctggtacgcagtttttcccgaacccaaga
tcttaa
DBGET
integrated database retrieval system
