Gossypium hirsutum (upland cotton): 107897186
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Entry
107897186 CDS
T04793
Name
(RefSeq) golgin candidate 5-like isoform X1
KO
K20286
TATA element modulatory factor
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107897186
Membrane trafficking [BR:
ghi04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
107897186
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Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
DUF7491
Motif
Other DBs
NCBI-GeneID:
107897186
NCBI-ProteinID:
XP_016678035
UniProt:
A0A1U8IIV1
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Position
A10:13321960..13332994
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AA seq
956 aa
AA seq
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MAWFSGKVSLGGFPDLAGAVNKLQESVKNIEKNFDTALGFEEKSESSNNEASGLWSSERK
PLFDPVLAFMGQKSEESAPELSGKLESSHAPPEVEEKEKAETDRSVHSHVKTTVEEDKQT
DELEKDNEHLETVNREDTATLDPCKAESESGSETVPAEPSESVSMKVESSDSSDNEQQKE
SSDVVSSAGSDSKEAKLDTAEVSPVEVAEPVPAESSTAVDMHETNEQKTQMNEILEKGSP
IKSEESSDSQADAGNGPDELTPSSSNSVVVEETKSAQALLSPTEPIVLENDESAKTVEVD
RQINDGEADAKEELRLSSAAAISDSADPIHELEKVKMELKMMESALQGAARQAQAKADEI
SKLMNENEQLKAVIEDLKRKSNEAEMESLREEYHQRVSILERKVYALTKERDTLRREQNK
KSDAAALLKEKDEIINQVMAEGEELSKKQAAQEAQIRKLRAQIRELEEEKKGLTTKLQVE
ENKVESIKKDKTATEKLLQETIEKHQAELAAQKDFYTNALNAAKEAEALAEARANNEART
ELESRLREAEEREAMLVQTLEELRQTLSRKEQQAVFREDMLRRDIEDLQKRYQASERRCE
ELITQVPESTRPLLRQIEAMQETTSRRAEAWAAVERSLNSRLQEAEAKAAAAEERERSLN
DRLSQTLSRINVLEAQISCLRAEQTQISRSLEKERQRAAENRQEYLAAKEEADTQEGRAN
QLEEEIRELRRKHKQELQDAYVQQERLQQEVEREKAARLDLERTMHVHSMAISEQAPMAR
HNSASENGSLSRKLSTASSLGSMEESYYLQASLDSSDGFSEKRNIGEATLSPLYMKSMTP
SAFESALRQKEGELASYMSRLSSMEAIRDSLAEELVKMTEQCEKLKAEAATLPGIRAELE
ALRRRHTAALELMGERDEELEELRADIVDLKEMYREQVNLLVNKIQIMNSSAGNTY
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggcttggttcagcgggaaggtgtccttagggggctttcctgatcttgctggggcagtc
aataagctccaagagagtgtgaagaatattgagaagaactttgatacagctctcgggttt
gaggagaagtctgaatcaagcaacaatgaagcctcaggattgtggtcttcagaaagaaaa
ccactatttgatccagttctggcctttatgggtcagaaaagtgaggagagtgctcctgaa
ttatctggaaaacttgaatcttcacatgctcctcccgaagttgaggaaaaagaaaaggct
gaaactgacaggtctgttcattctcatgtgaaaaccactgtcgaagaagataaacaaact
gatgagttagaaaaagataacgaacatttagagactgtgaatagagaagatactgcaact
ttggacccctgtaaagctgaatctgaatctggatcagaaacagttcctgcagagccttct
gaatctgtcagtatgaaagttgagtcgtcagattcttcagacaatgaacaacagaaagaa
agctcagatgtagtttcttctgcaggttctgactccaaggaagccaaactagatactgca
gaggtaagcccagttgaggttgctgagcctgtgccagctgagtctagtactgcggtagac
atgcatgaaactaatgaacaaaagacacaaatgaacgagattttagagaaaggttctcca
attaaatctgaggaatctagtgatagccaagctgatgctggcaatggccctgatgaactg
acgccctcaagttcaaattctgttgtcgttgaggagactaaaagtgcccaggcacttttg
tctcccactgaaccgattgttcttgaaaatgatgaaagtgctaaaacagttgaagtggac
cggcagattaatgatggtgaagctgatgctaaagaagagttacgcttgagttctgcagct
gccatatctgactctgcagatcctatccatgaattggagaaggtgaagatggaattgaaa
atgatggaatccgcattgcaaggtgctgcaagacaagctcaggcaaaagctgatgaaatt
tctaagctcatgaatgagaatgagcagcttaaagctgtaattgaggatttgaagagaaaa
tccaatgaagcagaaatggagtctttgcgagaggaatatcatcaaagggtttcgattctt
gaaaggaaggtttatgccttgactaaagaaagggatactcttcgaagagagcagaataaa
aaaagtgatgctgctgctcttttgaaggaaaaagatgaaataattaatcaagtcatggct
gaaggtgaagagctttcaaagaagcaggccgctcaagaagctcaaatcaggaaattgaga
gctcagattagagagctcgaagaggagaagaaaggcctgactacaaagcttcaggttgaa
gagaacaaggtagagagtatcaaaaaggacaaaactgctacagagaagttgcttcaggaa
acaattgaaaaacaccaagcagaacttgcagctcagaaagacttttatacaaatgctcta
aatgctgcaaaggaggctgaagcactagctgaggcacgtgccaacaatgaagccagaact
gaactggagagtcgattaagagaggctgaagaacgtgaagccatgctagtacagacgctt
gaagagttaagacaaaccttaagcagaaaggagcagcaggcagtatttagagaagacatg
cttcgcagggacatcgaagatcttcaaaaacgttatcaggcaagtgaacgtcggtgtgag
gagttgattacacaagtgcctgagtctacaagacctcttttaaggcagatcgaagccatg
caggaaacaacttccagaagagcagaagcttgggctgcagtggagagatctctaaactct
cgtctccaggaagcagaggcaaaagctgctgctgctgaagagagagagcggtctttgaat
gatcgcttatctcaaaccttatctcgaattaatgttcttgaagctcagatttcatgtctt
agagcagaacaaacacagataagcaggtcccttgagaaagagagacagagagctgctgag
aatagacaggagtaccttgcagcgaaggaggaagcagatactcaagaaggtcgggcaaac
cagcttgaggaagaaattagggaactaagacggaaacataagcaagagttacaagatgct
tatgtgcagcaggaacgcctacagcaggaagtagaaagggagaaagctgctcggttagac
ttggaaaggacaatgcatgtgcattctatggctatatctgagcaagctccaatggcaagg
cacaattctgcttcggagaatggaagcttgtcccggaaactctctactgctagcagccta
ggaagtatggaggaaagctattatctgcaggcatcattggactcatctgatggtttctct
gaaaagagaaatattggagaggcaacattaagtccgctctacatgaagagcatgacaccc
agtgcgtttgaatctgcccttcgtcagaaggagggtgaacttgcatcctacatgtctcgt
ttgtcttccatggaagctatccgtgactccttagccgaggagttggtgaaaatgacagaa
cagtgtgaaaagttgaaggcagaggctgccacactgcctggaatccgggcagagctagaa
gccttgaggcggagacatactgctgcgctggagctaatgggtgagcgtgatgaagagcta
gaggaactccgagctgacattgtagacttgaaggaaatgtatagagagcaagtaaacttg
cttgtgaataagatccaaataatgaattcttcggcgggtaatacatattaa
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