Gossypium hirsutum (upland cotton): 107897196
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Entry
107897196 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107897196
KO
K17925
sorting nexin-13
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
107897196
Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
107897196
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
107897196
NCBI-ProteinID:
XP_016678042
UniProt:
A0A1U8IIT4
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Position
A10:complement(13234874..13241976)
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AA seq
1139 aa
AA seq
DB search
MNRQKPKPVTVGDLVEEAKKRIVILAICVVGLSYLMSVTSSSVLVNLPAAASLIILLRYF
SLEYEMRRKADAYNIKSEATDSLTSKQPPECPKVIGHCDWRRKVNSPVVENAIDQFTRHV
ISEWVTDLWYSRLTPDKEGPEELVQIINGVFGELADRMRNINLVDLLTRDLINLFCSHLE
LFRISKAKFENQQSAPLTIEYRDAEIRRVLAAENKLHPALFSTEAEHKVLQHLMNGLISL
TFRPEDLQCTFFHYVVRELLACAVIRPVINLVSPRFINERIESAVITMTKAKGGLNAAQD
ASQHKPNSSSKIPSDHFSKFLDPSVTGVELVQLKTNQSGAAGGTTAADNLNGTQLSKDPL
LSMDTRTSRSWSSVSLNSQTGAERGIERHRSGGEWGDMLDLMSRRKTEALAPENFENMWT
KGRNYKKKEGEKRFTEQVPQHSSAGNPATVDHSKVVSKTRDKYPTKLNSSESYGAQHALT
DKWKIEKSFPHEVRNVPHCSSVLSYQEDDDHDLVDFEEVESESNDSFTSGEEEAGNVLGL
DATGTKVWDSKSNRNLTVSHIHHPLENPAGHMVKKAGGMRVQYRRLTRATSSRKRSRLTG
QKLPVWQEVERTSFLSGDGQDILNSLNGHGKTEYSSDDSEAEFFGRLHSGASASSSASSV
AVSETCNLTANSLQNSLAVGSFFKLRCEVLGANIVKSGSKTFAVYSISVTDVNNKHSWSI
KRRFRHFEELHQRLKQFPEYKLHLPPKHFLSTGLDIPVIRERCKLLDEYLKKLLQLPTIS
GSIEVWDFLSVDSQTYVFSNSFSIIETLSVDLDDNPSEKGRKASNVMGPLMGPLSSSRQL
LDTESKGPSSQIRPNHATDGLRKAKDVRYSPSKNPTEEWCKSVEDTGSGDARVRNTSSTK
NTGKNVKGRENERVEDASELLLDAATYPTLPVEWVPPNLTAPLLDLVDVIFQLQDGGWIR
RKAFWVAKQILQLGMGDAFDDWLIEKIQMLRRGSVVASGIKRIEQILWPDGIFITKHPRR
QRPPPSSSPSQASPRSQSPELSSPRLTDEQQQLEAERRAKFVYELMIDKAPAGIVGLVGH
KEYEQCAKDLYFFIQSSVCLKLLAYDLIELLMLSAFPEMEYVFKQLHEEKHKFGEYKAN
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggcaaaagccgaagccggtgacggttggtgacttggtggaggaagccaagaag
cgaattgtgattttagctatatgcgtcgtcggattgtcctatctcatgtcagtgacaagc
tcctcggttttggttaatttgcctgctgctgcctccttaatcattctcctccggtatttc
tcgctcgaatatgaaatgcggaggaaagctgatgcatacaacatcaaatctgaagctaca
gattccttgacttcaaagcaaccaccagaatgtcctaaagttattggacattgtgattgg
agacgtaaagtaaattctcctgtcgttgagaatgcaatagatcaattcacaagacatgtt
atttctgagtgggtgacagatctatggtattctcgtttaacacctgataaggaaggtcca
gaagaattggtgcagatcataaatggtgtttttggggagctagcagaccgcatgagaaat
ataaatctcgttgatttactcacaagggacctaattaatctcttttgttcacatttggag
ctttttcgtatcagtaaagctaaatttgaaaatcagcaatctgcaccactaactatcgag
tatcgagatgctgaaataagacgtgttctggctgcggagaataaactgcacccagcttta
ttctctactgaagctgagcacaaggtgttgcaacatttgatgaatggtctaatttctctc
acattcaggcccgaagatctgcagtgcactttctttcattatgttgtcagggagcttctg
gcctgtgcagtaattcgacctgtcataaacttagtgagtccaaggtttataaacgagagg
atcgaatctgctgttataactatgacaaaggctaaaggaggactcaatgctgcacaagat
gcatctcaacacaaaccaaatagttcctcaaagatcccatctgatcatttttctaagttt
ctagatccttctgtcactggtgttgaacttgtacagttgaaaactaatcagtccggagct
gctggaggcaccactgcagcagataacctaaatggaacacaactttcaaaggatccattg
ctttccatggatactcgaacttctcgttcatggagctctgtgtccttgaattcacaaact
ggtgctgaaagaggtatcgaacgacatcgttctggtggagaatggggtgacatgttagat
ctcatgtcacgtagaaagactgaggcccttgctcctgaaaattttgagaacatgtggaca
aaagggagaaattacaaaaagaaggaaggtgaaaaacgatttactgaacaagttccacag
cattcctctgctgggaaccctgctacagtggatcattcaaaagtagtatctaagaccaga
gacaagtatccaaccaagcttaactcatctgagagttatggtgctcaacatgcactaact
gataagtggaaaatagaaaaatcattcccacatgaagttaggaatgtaccacactgctct
tcagtactatcttatcaggaagatgatgatcacgaccttgttgattttgaagaggttgaa
tcagaaagcaatgattccttcacttcaggagaagaagaagcaggaaatgtactgggtctt
gatgctactggaactaaagtttgggatagtaagagtaacagaaatctgaccgtttctcac
attcatcatccacttgaaaatcctgcaggccatatggtaaagaaggctggtggaatgcgt
gtccaatatcgaagattaactagagccacatccagcaggaaaagatctagattgaccggt
cagaagttgcctgtctggcaagaggttgagagaacaagcttcctatcaggagatggacaa
gacatacttaattcattgaatggacatggaaaaactgaatattccagtgacgattctgag
gctgaattctttggtcgacttcacagtggagcaagtgcttcttcatctgcttcttctgtc
gctgtttcagaaacttgtaatttgactgctaattccttgcaaaattcgttggctgtgggt
tctttttttaaattgagatgtgaggttttaggtgcaaacattgtgaagagtggttctaaa
acatttgctgtttactccatatctgttacagatgtaaataacaagcatagttggtctatc
aagagaaggtttcgacattttgaggagctgcatcagcgccttaaacaatttccagagtat
aaacttcacttgccgccaaaacattttctctcaacaggtttagacattcctgtaatacga
gaacggtgtaaattgcttgatgaatatttaaagaagctcctgcagcttcctactatttca
ggatcaattgaagtttgggacttcttaagtgttgattcgcagacatatgtattctcgaat
tctttttctatcatcgaaactttgtcagttgaccttgacgataatccatctgaaaaggga
agaaaggcttcaaatgttatggggcctctgatgggtcctttatcttccagtagacaacta
ttagacaccgaaagcaagggaccttcatcgcaaatcaggcctaatcatgcaacagatgga
ttaagaaaagcaaaagatgtgcgttattctccatcaaaaaatcccactgaagaatggtgc
aagtctgttgaagatacaggcagtggtgatgctagagtgcgaaatacttcgtctacaaaa
aacacagggaagaatgttaaaggaagagagaatgaaagagtggaagatgcttctgagttg
cttcttgatgctgctacatatccgacccttcctgtggagtgggtgccaccaaatttaaca
gctcccttgttggatttggtggatgtcattttccagctccaggatggtggatggataagg
cggaaggctttttgggtggccaaacaaattctacaacttggaatgggtgatgcttttgat
gactggctgatagaaaagatccagatgctgcgcagggggtcagttgttgcatcagggatc
aagcggattgagcagatactttggcctgatggaatattcataaccaaacatccaaggcga
caacgtccgccaccatccagtagcccatcccaagcttcacctcgttcacaatctcctgaa
ttatcttcacctagattgactgatgagcaacaacaactggaagcagaacgtcgtgcaaaa
tttgtttatgagctaatgattgataaagcacctgctggtattgtgggtcttgttggtcac
aaggaatatgaacagtgcgccaaggatctctatttctttattcagtctagtgtctgtttg
aagctgctggcatatgaccttattgagctattgatgttgtcggcatttccagagatggaa
tatgttttcaagcagttgcatgaggaaaaacataagtttggtgaatataaagcgaactaa
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