Gossypium hirsutum (upland cotton): 107897200
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Entry
107897200 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA helicase DDX11-like
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107897200
Enzymes [BR:
ghi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107897200
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
107897200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
Motif
Other DBs
NCBI-GeneID:
107897200
NCBI-ProteinID:
XP_040934691
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All DBs
Position
A10:complement(13221465..13231509)
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AA seq
746 aa
AA seq
DB search
MNALYHSLDKGGVSMLESPTGTGKTLSIICSSLQWVLDQRQKDQSEKRVESDEKKGKNGE
IGSDDEPDWIKNFVVNKDNQVDEKKSEKNKHGFASEKYKKRMNKDIKKNDVVDLDDNEFL
LEEYESEEEGGIGSLNSKRKGNKFTVNSSSEEEEDEFEEEEEVKLKVYFCSRTHSQLSQF
VKELRKTIFANEMNVVSXSRKNFCINEEVLRLGNSTQINERCLELQKSKKKEISKLKLEN
VHSHIEKYFGRFRSLLGPGNRRYIQTLLVLTRAFLRVLLNDKDGNRLNTCPDAEKGVKRK
KTFDSSMAINDFLFSLDIDNINLIKLFQYIKESNIMHKVSGYGDKMTTMQKGLAVKENGE
SCDHGTILSGFQALANMLLSLTNNDGDGRIIISRKRPSSSGQGAYLKYVMLTGEKIFSEI
VHETHAVILAGGTLQPIEETRERLFPWLPSDHLHFFSCSHIVPPESILPLAVSRGPSGRS
FDFSYGSRSSSTMIEELGLLLCNLATVIPEGIVVFFSSFEYEGQVYDAWKTSGILERILK
KKHIFREPRKNTEIEVILMKYKEAIDNPAPKSGAILLAVVGGKISEGINFSDGMGRCIVM
VGLPYPSPSDIELLERVKHIESLGDTSSMEIPKLSISEEHYGGDVQSGFSILRSCRRRGK
EYYENLCMKAVNQSIGRAIRHVNDYAAILLVDIRYASDSSKRSFSHPSSKLPQWIKESLV
SATNNYGEVHKLLHQFFRFNKNRNCN
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcactttatcactctttggataaaggcggcgtctccatgctcgaaagccccacc
ggaaccggcaaaactctgagcattatctgtagttctttgcaatgggtgcttgatcagaga
caaaaagatcaatctgaaaaaagggtagaatctgatgaaaaaaagggaaaaaatggtgaa
attggttcagatgatgaacctgattggatcaaaaactttgttgtgaacaaagacaaccaa
gttgatgagaagaagagcgaaaaaaataaacatggttttgcatcagaaaaatacaaaaaa
agaatgaataaagatattaagaaaaatgatgtggtggacttggatgataatgagtttctg
cttgaagaatatgaaagtgaagaggaaggcggtattggaagtttgaattcaaaaaggaaa
ggcaataagtttactgttaattcttcgagtgaagaggaggaagatgagtttgaggaagag
gaggaagtgaaattgaaggtctatttttgcagtcgaacgcattcgcagctttcacagttc
gtgaaggagctaagaaagactatctttgccaatgaaatgaatgttgtgtcgnnttcaagg
aagaacttttgcatcaatgaagaggttttgagactaggaaactctactcaaattaatgag
cgttgcttggagcttcaaaagagtaagaaaaaggaaatttctaaattgaagttggagaat
gtacatagccacatagagaagtacttcggaagattccgcagtctattgggtcctggaaat
cgaagatatattcaaacacttttggtccttacccgggcattcctccgcgttctactcaat
gataaggatgggaatcgtttaaacacttgcccagatgctgaaaaaggtgttaagagaaaa
aaaacctttgactcttccatggccataaatgattttttattctccctcgatattgacaac
attaatttgatcaaactgtttcagtatataaaggaaagcaacattatgcataaggtcagt
gggtatggagataaaatgactaccatgcagaaaggtttagcagtcaaggaaaatggggaa
agttgtgatcatggtaccattctatctggctttcaggcattagcaaatatgttattgtca
ctgacaaataatgatggtgatggaaggataataatctcaaggaagagaccatcatcttca
ggacaaggggcttacttgaaatatgttatgctcacaggggaaaagattttctctgagatt
gtgcatgaaacacacgctgttatactcgcagggggaactctgcaaccaatagaagaaaca
agagagagactttttccatggttaccatcggatcatctccatttcttttcatgtagccac
attgttcctcctgagagtatattgccacttgcggtatctcgtggaccatccgggagatct
tttgattttagctatggttcgagaagttcatcaactatgatagaggaactaggtctctta
ctttgcaatttggcaacagtcattcctgaaggaattgttgtgttcttttcttcattcgag
tatgaaggacaggtctatgatgcatggaaaacctcaggaatacttgaaaggattttgaag
aaaaagcacattttcagagaacctagaaaaaatacagagatagaggtcattctcatgaaa
tacaaggaagcaattgataaccctgctcctaaaagtggtgcaatactcctagctgtggtt
ggtggcaagatatcagaaggcatcaacttcagtgatgggatgggtcgatgcatagtcatg
gttggactcccctatcctagcccttctgacattgaattgttggaaagggtgaagcatatt
gaaagcttgggtgatacaagttctatggaaatcccaaaactttcaattagtgaagaacat
tatggaggagacgttcagtctggtttcagcattctaaggagttgtaggcgcagggggaaa
gaatattatgaaaatctatgcatgaaagctgtaaatcaatcaatcggtagagcaattcgg
catgtaaatgactatgctgcaattttattagtggacatccgttatgcttcagattcttcg
aaaagaagcttttctcatccaagcagcaaactcccacagtggataaaagagagtcttgtt
tctgcaactaataattatggtgaagttcacaagctgctgcatcagttcttcagattcaac
aaaaacagaaattgtaattag
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