Gossypium hirsutum (upland cotton): 107897226
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Entry
107897226 CDS
T04793
Name
(RefSeq) pleiotropic drug resistance protein 1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107897226
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107897226
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
107897226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA_28
AAA
AAA_25
Rad17
AAA_30
RsgA_GTPase
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
107897226
NCBI-ProteinID:
XP_040934677
UniProt:
A0ABM2YVZ9
LinkDB
All DBs
Position
A10:12519628..12526807
Genome browser
AA seq
1432 aa
AA seq
DB search
MQGADIYRASGSLRRSPSAWINNDLEVFSRSSREEDDEEALKWAALEKLPTVSRLRKGIL
TSSEGGASEINIHDLGWVERKALLERLVKVAEEDNEKFLLKLKNRVARVGIDFPTIEVRF
EHLNIEAEAFVGTNALPTILNFITSLFEGFLIDMGILSSRKKKLTILNDVSGIIKPSRLT
LLLGPPSSGKTTLLLALAGKLDPALKCSGKVTYNGHGLDEFVPQRTAAYISQHDLHNGEM
TVRETLAFSARCQGVGDRYELLAELSRREKQANIKPDPDMDVYMKAVATEGQEANVITDY
VLKVLGLEVCADIMVGDEMLRGISGGQRKRVTTGEMLVGPAKVLFMDEISTGLDSSTTFQ
IVNSLKQTVHILNGTAIISLLQPAPETYNLFDDIILLSDGQIVYQGPREHVLSFFESMGF
KCPERKGVADFLQEVTSRKDQQQYWVHKDQPYRFVTANEFSEAFQSFHVGKKLRDELGVP
YEKTKSHPAALTTKKYGVGRKELLEACISREYLLMKRNSFVYIFKFIQLSIMAFITMTLF
LRTEMRNDSIEGGGIYMGALFFGLIAIMFNGMSEISMTIAKLPVFFKQRDLLFFPSWAYA
LPTCILKIPISFLEVSLWVFLTYYVIGFDPNVERLFRQYLILVLVTQMSSGLFRFIAAAG
RNMVVANTFGAFALLILFALGGFVLSREDIKKWWIWGYWISPMMYGQNALMVNEFLGNQW
RRILPGSNEPLGISILKSRGFFQDPRWYWFGVGGLLGFIVLFNFFYTMALAYLKPFEKIQ
ALISEELEEKEKAESSSEVQDDTKTSISSKSSSMDEVTTGNKKKGMVLPFEPHSITFDDI
IYSVDMPQEIKEQGVNEDKLVLLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTSG
YIEGNITVSGFPKKQETFARVSGYCEQNDIHSPHVTVYESLLYSAWLRLPKKVNAETRKM
FIDEVMDLVELNPLKQAQVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR
AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGHHSKHLI
DYFEGIQGVSKIKDSYNPATWMLEVSTTAQELALGVDFADTYKKSELYKRNKTLIKDLSK
PAPGSKELYFPTQFSQPFLTQCAACLWKQRWSYWRNPAYTAVRLLFTTVIALMFGTLFWD
LGTKTRKRQDLANAMGSMYAAVLFLGIQNAASVQPVVAVERTVFYREKAAGMYSAMPYAI
AQVLIEIPYIFVQAVVYGLIVYVMIGFEWTAAKFLWYLFFMYFTLLYFTFYGMMAVAVTP
NHHIAGIVSSAFYGIWNVFSGFVIPRPRIPIWWRWYYYICPVSWTLYGLVVSQFGDIQDV
LENGQTVEQYLRNYLGFKHEFIGIVAVIIIAFTILFGAIFTVSIRLFNFQIR
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgcagggtgctgatatttatagagctagtggtagtttacggaggagtccttcggcatgg
ataaacaatgacctggaggtattttcaaggtcttctcgagaagaggatgatgaagaagct
ttaaagtgggcagcacttgagaaactacctactgtttctcgtctcaggaaaggtatattg
actagttctgaaggtggtgccagtgaaatcaatattcatgaccttgggtgggtagaacgg
aaggctttgcttgagcggttggttaaagtagcagaggaagataatgagaagttcttgttg
aagctcaagaaccgtgtagctagggttggcattgattttcccacaattgaagtccggttt
gaacatctaaatattgaagctgaagcttttgttgggaccaatgctttgccaacaattctt
aatttcattactagtttatttgagggtttcttgattgatatgggtattctttctagtaga
aagaaaaagctgaccatcctcaatgatgtcagtggcatcattaagccgagcaggctgaca
ttgcttttgggtcctccaagttctgggaagaccactcttttgttagctttggctggaaaa
cttgatcctgctctcaagtgttcggggaaagtgacatataatgggcatggcttggatgag
tttgtgccacagagaacagctgcctatatcagtcaacatgatcttcacaatggagaaatg
actgtgagggaaactttggccttttctgcaagatgccaaggggttggagaccgctatgag
ctgttagcggagttgtcaagaagagagaaacaagcaaacattaaacctgatcctgatatg
gatgtttacatgaaggcagtagcaacagaaggtcaggaagcaaatgtaatcacagattat
gttctaaaggttttaggactagaagtatgtgcagacattatggtaggagatgaaatgtta
aggggtatctctggaggacagaggaagcgtgtcacgactggtgaaatgctggttggacca
gcaaaggtactgtttatggatgagatatctactggcctggacagctccacaactttccaa
attgtgaactccctcaagcaaactgttcacatccttaatggaactgcaatcatctctctt
ctccaaccagctccagagacttataatctttttgatgacatcattctcctttctgatggc
cagatagtatatcagggtcctcgtgaacatgtgttgagcttctttgaatctatgggcttc
aagtgtccggagagaaaaggagtggctgacttcttgcaagaagttacatcaaggaaagat
caacaacagtattgggtacataaagatcaaccttataggtttgtcacagccaacgaattc
tctgaggcattccaatcatttcatgtgggaaagaaacttagagatgaacttggtgttcca
tatgaaaagacaaagagccacccagctgctttgacaaccaaaaaatatggtgttggaagg
aaagagttgctcgaagcttgcatctcaagggaatatctgctgatgaagagaaactctttc
gtgtacattttcaagtttatacaactatcaataatggcattcattactatgacgctcttc
ctgaggactgagatgagaaatgattcaattgaagggggaggaatctatatgggggccttg
ttttttggcttgatcgcaatcatgtttaatgggatgtctgagatttctatgaccattgct
aagcttcctgtctttttcaagcagagagacctcctattctttccttcatgggcatatgct
ttaccaacatgtatactcaagatccccatctcatttttagaagtttccttatgggtgttt
cttacctactatgtcattggatttgatccgaatgttgaaaggttgtttaggcaatacctc
atccttgttctggtgacccaaatgtcttcaggattgttccgatttattgctgcagctggt
agaaacatggttgtcgctaacactttcggagcttttgctttgctcatactttttgcatta
ggtggctttgtcctatcacgagaggatataaagaaatggtggatatggggctactggatt
tcccctatgatgtatggacaaaatgcattgatggttaatgaattccttggaaaccaatgg
agaagaattcttccgggctcaaatgaaccacttggaatttcaattttaaagtctaggggt
ttcttccaagatccacggtggtattggtttggagtagggggattgcttggattcatagta
ttgttcaacttcttttatactatggcgcttgcctatttaaagccttttgagaagattcag
gctctaatatcagaagaactagaagaaaaagagaaagccgaaagtagctcagaggttcaa
gatgacactaaaacaagcatctcatccaagtcatcgtctatggatgaagtaaccactggg
aacaagaaaaaaggaatggttctcccatttgaaccccattccatcacatttgatgacatt
atctattcagttgatatgccgcaggaaataaaagaacaaggtgtcaatgaagataaattg
gtgctattaaagggtgttagtggttcttttagaccaggagttctcacagctctcatgggt
gttagtggtgctggcaaaaccactctgatggatgtgcttgctggcagaaaaactagtggt
tatatcgaggggaacatcactgtttcaggttttccaaagaagcaagaaacatttgctcga
gtatctggatattgcgagcaaaatgacattcactctcctcatgtcactgtgtatgaatcc
ttgctctattctgcttggcttcgactaccgaaaaaggtcaatgctgaaaccagaaagatg
tttatagatgaagtcatggatcttgtggaactgaatccattaaagcaagcacaagtcggt
ttacctggtgtaaatggtttatcaaccgagcagaggaaaaggcttactatagctgttgag
cttgtggctaacccctctatcatcttcatggatgagccaacttcagggcttgatgcaaga
gcagctgcaattgttatgaggacagttaggaacacagtggacactggaagaacagttgtc
tgcaccattcatcaaccaagtatcgacatatttgaagcatttgatgagctattccttatg
aagcggggaggacaagagatatatgtggggccattaggacaccattccaaacatcttatt
gattattttgagggaattcaaggagttagcaaaatcaaagatagctacaatccagcaaca
tggatgttggaagttagcacaacagcacaggaattagctttaggtgttgattttgctgat
acctacaaaaagtcagagttatacaagagaaacaaaactcttattaaagatttaagcaaa
ccggctcctggttcaaaggaactctattttccaactcagttctctcagccattcttgact
cagtgtgctgcttgcttatggaagcaacggtggtcatattggcgcaaccccgcttatact
gctgtgagattactttttactactgtcatagcattgatgtttgggacactattctgggac
ctcggcactaaaacgagaaaaaggcaagatctggccaatgcaatgggttcaatgtatgct
gctgttcttttccttggtatccaaaatgctgcatccgtgcagcccgtggtggctgttgaa
aggacagtcttttatagagaaaaagctgctggaatgtattctgccatgccatatgcaatt
gctcaggttttaatcgagataccttatattttcgttcaagctgttgtgtatggccttata
gtgtatgtgatgattgggttcgaatggactgctgccaagttcttgtggtatctcttcttc
atgtacttcaccttattgtacttcaccttctatggcatgatggcagtggctgtcactcca
aatcaccacattgcaggcatagtttcctcagcattctatggaatatggaatgtcttctct
ggattcgtcatcccacgcccgagaattcctatatggtggagatggtactactatatttgc
ccagtatcttggaccttgtatgggttggttgtttcacaatttggagatattcaggatgtc
cttgagaatggtcagacggtcgaacaatacttgagaaattatttgggcttcaaacatgaa
ttcattggaattgtagcagttataattattgctttcacaatactctttggtgcaatcttc
actgtctccataaggttgtttaatttccaaatacgctag
DBGET
integrated database retrieval system
