Gossypium hirsutum (upland cotton): 107897258
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Entry
107897258 CDS
T04793
Name
(RefSeq) nucleolar and coiled-body phosphoprotein 1
KO
K03504
DNA polymerase delta subunit 3
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03030
DNA replication
ghi03410
Base excision repair
ghi03420
Nucleotide excision repair
ghi03430
Mismatch repair
ghi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107897258
03410 Base excision repair
107897258
03420 Nucleotide excision repair
107897258
03430 Mismatch repair
107897258
03440 Homologous recombination
107897258
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107897258
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghi03032
]
107897258
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107897258
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107897258
DNA replication proteins [BR:
ghi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
107897258
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
107897258
MMR (mismatch excision repair)
DNA polymerase delta complex
107897258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
107897258
NCBI-ProteinID:
XP_016678129
UniProt:
A0A1U8IQI0
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Position
D05:complement(56290663..56294746)
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AA seq
526 aa
AA seq
DB search
MSQIETLGILEEIQALVSDKLQVVSYKWLSRNFLVSSNVAKRLLAEFVEKHGSGLEVVYS
LSGWLKNSPSNYHIQLVTGPKLSEAKQVYDGNCRVHVYSVQACIPKDLAALWNTEFIQAE
ELFKQPTSVDNCLRDNRFCGISNSFVKRNVDGTPAKVATAQPNSVGISGLSIHNSAQFSA
PLPSQQNKVQQSSSKVAQKPPIVVKGIKSDSISGGVHDLATKPSADKEKNTSFPSNKKKG
QNDKGSTGNGGSLANFWDRASAKPKTCSAPADNIDSIQNSNDAQISACEAVEHENSDIDA
QEVNFGRASNSEGNRKRRVVLDLSDEDEYEDAVNLASPDPPKRKSFLGSIQNSKTSVPER
PDVDKPDKDEVTVKEERTANREPNRSLGEETSLGSKSTNGKNSSSVKLESQLPETDLKKD
KVTDASRNSPKRRKVLKTRIDDRGREVTEVVWEGEETEVKKVESDVPKKAGSGATNATTN
TVANTNSRYAVGTTAPSNPGVKTGNKKAGNAKDPKQGNILSFFKKV
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaattgaaaccctaggaattctcgaggagatccaagctctcgtctccgataaa
cttcaagtagtatcctacaagtggttgagtcgtaattttttagtctcatccaatgttgca
aagagattgcttgcagagtttgttgagaaacatggaagtggcttagaagttgtatatagt
ttgtctggctggttgaagaactctccatcaaattatcatattcagctcgtgacagggcct
aaactttcagaagccaagcaagtatatgatggcaattgcagagttcatgtgtatagtgtg
caagcttgcatcccaaaggacctggctgcactttggaatactgaatttatacaagctgaa
gagctcttcaagcagcccacctcagtggataattgcttgagagataacagattctgtggg
atttcaaattcatttgtcaagcgcaatgtcgatggaactcctgcgaaggttgcaactgca
cagccaaatagtgtgggaatctcaggactgtccatacataattctgctcaattcagtgca
cctttaccatctcaacaaaataaggttcagcaatcaagctcaaaagttgcccagaagcct
cccattgtggtaaaaggtatcaaaagcgacagtattagtggtggagtccatgatttggcc
accaagccttctgctgataaagaaaaaaatacttcctttccttctaataaaaagaaaggc
cagaatgataaaggctccactggaaatggaggttcattagcaaatttctgggatcgtgca
tctgcgaaaccaaaaacctgttctgcgccagcagataatattgattccatccaaaattct
aatgatgcacaaatttctgcttgtgaagcagtagaacatgagaacagtgacattgatgct
caagaagttaattttgggagagcttctaatagtgaaggcaataggaaacggagggtagtt
ttggatttatcagatgaagatgagtatgaagatgctgtcaatctagcttcacctgatccc
cctaaaaggaaatcatttttaggttcaatacaaaattctaaaacttcagttccagagagg
cccgatgtagacaaaccagacaaagatgaagtaacagttaaggaagagagaactgctaat
agagaacccaatagatcactgggggaagaaacttcacttggcagcaaaagcacaaatggt
aagaattcctcttcggtcaagcttgaaagccagcttcctgaaactgatttaaagaaggat
aaagtgactgatgcctcacgaaattcacctaaaaggaggaaagtgttgaagacacgtatt
gatgaccgtggaagagaagttactgaggtagtttgggaaggtgaggagacagaggtgaag
aaagttgaaagtgacgtgccgaagaaagctggaagtggagcaaccaatgctaccaccaat
actgtcgcaaatactaatagccgatatgcagttggaaccactgcaccatctaatccggga
gttaaaacgggaaacaagaaagctggaaatgcaaaggatcctaagcaaggaaacattcta
tctttcttcaaaaaggtctga
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