Gossypium hirsutum (upland cotton): 107897306
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Entry
107897306 CDS
T04793
Name
(RefSeq) AP3-complex subunit beta-A
KO
K12397
AP-3 complex subunit beta
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107897306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107897306
Membrane trafficking [BR:
ghi04131
]
Endosome - Lysosome transport
Others
AP-3 complex
107897306
Endosome - Golgi transport
107897306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
AP3B1_C
AP3B1_C_2
HEAT_2
INTS1_R4
Svf1_C
Motif
Other DBs
NCBI-GeneID:
107897306
NCBI-ProteinID:
XP_016678209
UniProt:
A0A1U8IQR1
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Position
A05:complement(41435613..41444650)
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AA seq
1135 aa
AA seq
DB search
MFPQFGATAETLSKASTMVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALI
AQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINCFQKDLGDPNPL
VRAWALRTMAGIRLHVIAPLVLVAVGKCARDPSVYVRKCAASALPKVHDLRLEEHTLAIE
EIVGMLLNDRSPAVVGAAAAAFASVCPYNLSLVGRNYRKLCEILPDVEEWGQIVLIGILL
RYVIARHGLVKESIMFSLQCTESSHSAKDGSDVDFGLVKESTDLSGTCDSEFLNTISRCY
MEGPDEYLSRSSYANRESFELNGAQFTSGKSNDDVKILLYSTSPLLWSNNSAVVLAAAGV
HWVMAPKEDVKRIIKPLLYLLRSSNASKYVVLRNIQVFAKAMPSLFAPYFEDFFIFSSES
YQIKALKLEILSYIATDSSISSIFKEFQDYIRDPDRRFAADTVAAIGLCVQRLPKMAHIC
VDGLLSLTRQEFVTKDFGFEDQEAGILTQVIMSIKSIIKQDPPSHEKVIIQLVRSLDSVK
VPAARAMIIWMVGEYSSLGEIIPRMLTTVLKYLAWGFPSEAPETKLQILNTVCKVLEGAT
GDDLWTFKKIFSYLIELAECDLNYDLRDRARLLKKLPSCNLVSLGLEEGTNDLPGNDLLH
IVAECILGRQTRKVKPKSFSYRYYLPGSLSQIVLHAAPGYEPLPKPCSLLLDDLNVAEGT
SEMKRAADYSGTDDYGSSSDPSDEESASDYDSQRSVTESSGSDRGDDSEFTSEGNDNADP
LIQISDIGNASENQNGVSQSSPANLGELMSNRALESWLDEQPGSLNPCLPKQSQVQISSA
KISVGDVGKQVKQKSYSLLDPASGNGLKVDYSFSSEISSISRLLVCIEVFFKNCSSEIIS
EITLVDEESNRAFDSADKTAVVNESPLTSSDDVPTLVPMESIVSLEPGQTTRRILQVRFH
HHLLPLKLALYCDGKKLPIKLRPDIGYFVKPLPMDVEVFIDKESHLPGMFEYARSCTFTD
HIVELNKENGDSLLVKDKFLAICESLALKMLSNANLCLVSVDMPIAANLDDASGLRLRFS
SEILSSSIPCLITIGVEGKCTDPLNLSIKVNCEETVFGLNLLNRIANFLVEPTLS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtttccacagttcggagcgactgcggagacgttgagcaaggcgtcgacgatggtgttc
cggatcggaaccgatgctcacctctacgacgatccggatgacgtcagcatagctccgctt
ttagatagtaaattcgattcggagaagtgtgaggctctcaagcgactcctcgctctcatc
gctcaaggcttcgacgtctccaattacttccctcaggttgttaaaaacgtggcatctcaa
tctttggaagtaaagaaacttgtttatttgtatctactgcattatgctgaaaagcgtccc
aacgaagcattgttgtcaattaattgtttccagaaggatttgggggaccctaatcccttg
gtgagagcatgggcacttcgcaccatggctggaattcgtcttcatgttattgcacctctt
gttctggtggctgtgggcaagtgtgctagagatccatctgtctatgttagaaaatgtgca
gctagtgctcttccaaaagtacatgatttgcgcctagaggaacataccttggcaattgaa
gagattgttgggatgttgttaaatgaccgctcccctgccgtagttggtgctgctgctgct
gcatttgcttctgtttgtccatataatttatctttggtcgggaggaattatagaaagtta
tgtgagattcttcctgatgtggaagagtggggtcagatagtcttgattggaattctttta
cgctatgttattgcaaggcatgggctagtgaaagaatccattatgttttctctgcaatgt
actgagagctcacattctgcaaaagatggttcagatgttgactttggactagttaaggaa
tccactgacttgagtgggacatgtgattctgaatttttaaacacaatttccaggtgctat
atggagggtccggatgaatatttatctaggtcaagttatgccaacagggagtcctttgaa
ttaaatggtgcacaatttacatctggaaaaagtaatgatgatgtcaagatcctgctttat
tctacatctcccctgttatggagtaacaacagtgctgtggtactagcagcagctggtgta
cactgggttatggcaccaaaggaggatgttaagagaatcattaaaccactcttgtatttg
ctgagatcctctaatgcctcaaaatatgtggttctacgcaacattcaagtgtttgctaaa
gcaatgccttctctctttgctccatactttgaggacttcttcattttctcttctgaatca
tatcaaatcaaagccttgaagcttgagatactttcttacattgctacagattcatccatt
tcttctattttcaaagagtttcaggattatattagagatccagacaggcgattcgctgct
gatacagttgctgcaattggtctatgtgtgcaacggcttccaaaaatggcacatatatgt
gtagatgggctgttgtctctgactagacaggagttcgtgacaaaagattttgggtttgaa
gatcaagaagcgggtattttgactcaggttattatgtctataaaatcaatcataaagcaa
gacccaccaagtcatgagaaggttataattcagttggtccgcagtttggattcagtcaag
gtgcctgcagctcgtgcaatgattatttggatggttggagaatatagctctttgggtgag
ataattcctaggatgttaaccacggtgctgaagtatcttgcatggggttttccttcagaa
gcaccagaaacaaagcttcaaattcttaacacagtgtgtaaggttctagaaggtgcaaca
ggagacgatctgtggacattcaagaaaatattcagctatttgattgaattggctgaatgt
gatttgaactatgatcttcgtgaccgagctcgtttattgaagaaacttccatcatgcaac
ttagtctctctaggactggaggaaggaacaaatgatcttcctggaaacgaccttctgcat
atagttgctgagtgcatattaggaagacaaacaagaaaagtgaaacctaaatcatttagt
taccggtattatctgcctgggtctctctcgcagatagttcttcatgcagctccagggtat
gagcctctcccaaagccttgtagtttgctccttgatgacctcaatgtggctgaaggaacg
agtgaaatgaaaagggcggccgattacagtgggacagatgattatggctcatcatcagat
ccttcagatgaggaaagtgcttctgattatgattctcaacgttcagtcactgaatctagt
ggcagtgatcgtggcgatgacagtgaatttactagtgaaggaaatgataatgcagatcca
ttgattcagatttcagacatcggcaatgcttctgaaaatcagaatggagtttctcagtct
tctcctgctaatctgggggaattgatgtcgaatagagctctggagtcatggttggacgaa
cagcctggttcattgaacccatgcctgccaaaacaaagtcaagtccaaatatcatcagca
aaaatatctgttggggatgttggaaagcaggttaaacaaaaaagttattcactgttagac
cctgctagtggaaatggtttgaaggtggattattctttttcatcagaaatatcaagtata
tcccgtctacttgtatgcatagaagttttctttaagaactgttcatcagagattatatca
gaaataaccttggttgatgaggaatctaacagagccttcgattctgctgacaagactgct
gttgtaaatgagagccccttgacatcctctgatgatgtgccaacactagttccgatggag
tcgattgtttctttagaacctggtcagacgacaagaaggattcttcaagttcgctttcat
caccatctattgcctttgaagctagctttatattgtgatgggaagaagcttccaattaag
ttgcggcctgatattggatattttgtaaaacccttaccaatggatgttgaagtcttcatc
gataaagaatctcatctcccagggatgtttgaatatgcaaggagttgcactttcactgac
cacattgtggagctaaacaaggagaatggggatagcttgttagtcaaagacaaatttctt
gcaatttgtgagagcttagcactaaaaatgcttagcaatgcaaatctttgtctcgtatct
gtcgatatgcccattgctgctaacctagacgatgcatcgggtttgcgcttacggttcagc
tctgaaatcttgagtagttcgattccttgtttaattaccattggcgttgaaggtaagtgc
actgatccattaaacttatccattaaagtaaactgtgaagaaactgttttcggcctaaat
ctgttaaacagaatagcaaatttcttagttgagcctaccctttcttaa
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integrated database retrieval system