Gossypium hirsutum (upland cotton): 107897352
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Entry
107897352 CDS
T04793
Name
(RefSeq) ABC transporter G family member 29-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107897352
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107897352
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
107897352
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA_25
AAA_28
AAA
RsgA_GTPase
nSTAND3
ABC2_membrane_3
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
107897352
NCBI-ProteinID:
XP_016678276
UniProt:
A0A1U8IJL5
LinkDB
All DBs
Position
A10:complement(8143374..8151475)
Genome browser
AA seq
1446 aa
AA seq
DB search
MQENIYAMDGIEKARSPRSSSSHNNLSSGIRLSLSKNHWTMDDVFAARNTGAEEDDEEAL
KWAAIEKLPTYDRLRTSIMNSFVENDDGNTNKFGPREVDVRKLDMDDRQRFINALLKVTE
EDNEKFLRRFRNRLDKVGIRLPKVEVRYERLNIEAETYLGSRALPTLVNSAQNIAELALA
MLGIRLSKPTKLNILKDISGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEVS
YNGYKLNEFVPQKTSAYISQHDVHVPEMTVQETLDFSARCQGVGTRYDLLSELARREKYA
GIYPEPEVDLFMKATAIEGAESSLVTDYILKMLGLDICKDTIVGDQMIRGISGGQKKRVT
TGEMIVGPTKTLFMDEISTGLDSSTTYQVVKCLQQIAHLTDATIFMSLLQPAPETFDLFD
DIVLISEGRIVYQGPREHVVEFFESCGFKCPERKGVADFLQEVTSKKDQEQYWADGSKPY
SYVLVTEFANRFKKFHVGVQLANELSMPFDKSRGHKAALVFSRYSVTKLELLKACWDKEV
LLMKRNSFFYIFKTTQIIIIAFFASTVFLRTRLHHRDEEDALLYNGALLYSLITNMFNGY
PEISLMITRLPVFFKQRDHLLYPAWAFAIPLLVTKIPLAIFETIAWMTLTYYPIGFAPGA
DRFFKKMLVVFMIQQMSASLFRLISGVCRTIVVSNTGGMFALMFVAFLGGFTLPRTQIPK
WWKWGYWLSPLTYGYTSLSVNEMYAPRWIKRRASDNVTELGVAMLEELEIYRNKNWYWIG
VGALLGFCILFNVLFTLALTYLNPPAGPQAVLPQDTGDETDSQSNPTRATTKKGMVLPFT
PLAMSFDKVNYYVDMPAEMKAQGLAENRLQLLREATGAFRPGILTALMGVSGAGKTTLMD
VLAGRKTGGYIEGDVRISGFPKRQETFARVSGYCEQTDIHSPQITVRESLIFSAFLRLPK
EINNKEKMTFVDQVMKLVELDDLKDGLVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMD
EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYFGR
LGRNSQKIIEYFEAVPGIPKIKEKQNPATWMLEVSSAAVEAQLGIDFAEHYKSSSLYQQN
QALVKALSTPPPGANDLHFITQYSQPMWGQFRCCLWKQFKAYWRTPEYNLVRLGFTLIAA
LIIGSIFWGAGTKMKNATQVSVITGGMYVAAMFLGVNNCQTAQPVVAIERSIFYRERAAG
MYSALPYAIAQVIVEIPFVVTQSSYFTLIVYAMMKFNWMAKKFFWFFFVNFCTFLYFTYY
GMMAVAISPNVQVAAILAAAFYALFNLFSGFYIPKPRIPPWWIWYYWICPMAWTVYGLIT
SQYGDDERTIEVQGMKLDPTIKWYLEHHFGFHHDFLWAVAVVLVVFPLFFAFMFGLCIKL
LNFQVR
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaaatatatatgcaatggatggtatagagaaagcaagaagtccaaggagtagt
tcaagccataataacctgagtagtggtataaggctcagcttgagcaagaaccattggaca
atggatgatgtttttgcagcgcgaaacactggagctgaggaagacgatgaagaagctctg
aaatgggctgctatagagaagttgccaacttatgataggttaagaacaagtatcatgaat
tcttttgtggagaatgatgatggaaacaccaacaagtttggtccaagagaagttgacgtg
agaaagctggacatggatgaccgacagagattcattaacgcactgcttaaggttactgaa
gaagacaacgagaagttcttgaggaggtttagaaacagacttgataaggtggggattcga
cttcctaaagtggaagttaggtatgagcgtttgaacattgaagcagaaacctatctgggt
agcagagctcttccaactcttgtaaattcggctcaaaatattgctgaattagctcttgcc
atgcttggtattaggttgtccaagccaaccaaacttaatatccttaaggatatctctggt
attatcaaaccatccaggatgacccttttgctaggcccaccatcctctggaaaaacaacc
cttttgcttgcattggctggaaaattggatccaagcttaaaggttagtggggaagtaagc
tacaatgggtacaaactcaatgaatttgttccccaaaagacctctgcatatatcagccaa
catgatgttcatgttccagaaatgacagttcaagaaaccttagatttctctgcaaggtgc
caaggggttggaactcgatatgaccttttaagtgaacttgcgaggagggaaaagtacgca
ggcatttaccctgaaccagaagttgaccttttcatgaaggcaactgcaattgaaggagct
gaaagcagtcttgtcactgactacattctcaaaatgttgggcctcgatatatgcaaggat
acaatagttggagatcagatgattagaggcatatctggaggacagaaaaaacgagtaaca
acaggagagatgatcgttgggccaaccaaaacattgttcatggatgagatatcaaccggc
cttgatagttccacgacatatcaagttgtcaagtgcttgcaacagattgctcatctaaca
gatgccactatctttatgtccttactacagccagctcctgagacgtttgatctctttgat
gatatagtgctcatctctgaaggtcggattgtttatcaaggtccacgggagcatgtcgtt
gaattcttcgagagctgtgggttcaaatgtcctgagaggaagggggttgcagatttcttg
caagaggttacttcaaaaaaggatcaagaacagtattgggcagatggaagtaaaccatac
agttatgttctagttactgagtttgcaaataggtttaagaagttccatgttggagtgcag
ctagcaaacgagctctcgatgccttttgataagtccaggggccacaaagcagccttagtc
ttctcaagatattcagtaacaaaacttgaacttcttaaggcctgctgggataaagaagtg
ttactgatgaagagaaactcattcttttatatcttcaagacaactcagattattattata
gcattcttcgcatcgacagtgtttctcaggactagattgcatcatagggatgaagaagat
gcattgctatacaacggtgctcttctctattcacttatcaccaacatgttcaatggttat
cctgagatttcacttatgatcactaggcttccagtttttttcaagcaaagagaccactta
ctctatccggcatgggcattcgccatcccattactcgtgacaaagatacctttagccatt
tttgagacaattgcttggatgacactgacatactaccccataggatttgcaccaggggct
gacaggtttttcaagaaaatgcttgtggtatttatgatccaacaaatgtctgcttcatta
tttaggctcatctcaggggtctgcaggaccatagttgtttcaaacactggcggaatgttt
gctctgatgtttgtggcatttctgggaggtttcacccttcctagaactcaaatacctaaa
tggtggaaatggggttactggctttcacctttgacatatggttacacttctctttctgtt
aatgaaatgtatgctccaaggtggattaaaagacgggcttctgacaacgtaaccgaattg
ggggtggcaatgcttgaagaattagaaatatatcgtaataaaaattggtattggattggt
gtaggagctcttctggggttctgtatccttttcaatgtcctatttaccctggcactcact
tatctgaaccctccggcaggcccacaagcagtacttccacaagatacaggcgatgagaca
gacagtcaatcaaatccaacacgagcaacaaccaagaaaggaatggttcttccattcact
cctttagcaatgtcatttgacaaagtgaactactatgttgacatgcctgcagaaatgaag
gcacaaggcttagcagagaacaggttgcaattacttcgagaagcaacaggtgcatttagg
cctggaattttgaccgctttaatgggagttagtggagctgggaagactacgttgatggat
gttttggctggaagaaaaactggtggatacattgaaggtgatgttagaatatcaggattc
cccaaaaggcaagaaactttcgccagagtctctggatattgtgaacaaactgatatacac
tcaccccaaatcacggtcagggaatccctgattttttcggctttccttagacttcctaaa
gaaattaacaataaagaaaaaatgacttttgtggatcaagtgatgaaactggtagagtta
gacgatctgaaagatggcctagtagggctgcctggagttacagggctgtcaacagagcag
agaaaaagattgacaattgcagtagagcttgttgctaatccttcaattattttcatggac
gaacctacatctgggcttgatgcaagggcggctgctatcgtcatgagaactgtgagaaac
actgtggatactggtagaactgtcgtctgcacaattcatcaacctagcatcgatatattt
gaagcctttgatgaattgttattgatgaaacgtgggggacaagtaatctactttggacga
ttgggtcgaaattcccaaaagattattgaatattttgaggcagttcctggtattcccaaa
attaaggagaaacaaaatccagcaacttggatgctagaagtgagctcagcagcagttgaa
gcacaacttggaattgactttgcggagcattataagtcatcgtctttgtatcagcaaaac
caagctttagtaaaagcgctaagcacaccacctcctggagctaacgacctacatttcatc
actcaatattctcagcctatgtgggggcagttcagatgttgcctctggaagcaattcaaa
gcttactggagaacccctgaatataaccttgtcagattaggtttcactttgattgcagct
ctaatcatcggatcaattttctggggagctggaacaaaaatgaaaaatgcaactcaggtt
tctgtgataacgggaggcatgtatgtagctgccatgtttctcggagttaataactgccaa
acagcccaaccagttgtagccattgaaagaagcatattttatcgagaaagagcagccgga
atgtactctgcattaccttatgcaattgcacaggtaatagtagaaataccatttgtggta
acccaatcttcatattttacacttattgtgtatgctatgatgaagttcaactggatggcg
aaaaagttcttctggttcttttttgttaacttctgcaccttcctttacttcacatactac
gggatgatggctgttgccatctctccaaatgttcaagtagctgccatcttagctgctgct
ttctatgcactctttaatcttttctccggcttctacattccaaaaccaagaatccctcca
tggtggatatggtattattggatctgcccaatggcatggacagtatatggattgatcacg
tcgcagtatggagatgatgagcgcactatagaagtacaagggatgaagcttgaccctact
attaaatggtacttagaacaccatttcgggtttcaccatgatttcctgtgggcagttgct
gtggttttggttgttttcccattgttctttgcattcatgtttgggttatgcatcaagttg
ctgaacttccaagttcgatag
DBGET
integrated database retrieval system
