Gossypium hirsutum (upland cotton): 107897358
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Entry
107897358 CDS
T04793
Name
(RefSeq) DNA repair protein RadA isoform X1
KO
K04485
DNA repair protein RadA/Sms
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107897358
DNA repair and recombination proteins [BR:
ghi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
107897358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
DnaB_C
ChlI
Zn_ribbon_LapB
AAA_22
NACHT
Lon_C
AAA_16
AAA
Spore_III_AA
nSTAND3
DEAD
AAA_19
SLFN-g3_helicase
ABC_tran
AAA_5
NTPase_1
DAP3
Isochorismatase
KdpD
AAA_29
Motif
Other DBs
NCBI-GeneID:
107897358
NCBI-ProteinID:
XP_016678285
UniProt:
A0A1U8IJL2
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Position
A10:7793419..7801610
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AA seq
636 aa
AA seq
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MQIIEMKVLRSIYYTHTHFLHRNLSRTPVSLSLFSRHFHSSNPRFSLNSLETDGTQRAPH
AWTAYEGLTPDLSTPTNRHKGITQGNESASGDETDADFETHRTYGKAKNANLSDGDKTQM
AKNARYIPNENTDGMSRKKAFSVNGLGLGDIVGNKKKGKSRVKWVCENCGYSDGQWWGVC
RSCDFSGTMKRFSEVETKNRGLEFSETLARSWLPKDTGDVEPVKLIDVNSGVKKTDYRIP
LFGPFGSEVARVLGGGLVPGSLVLIGGDPGVGKSTLLLQMAALIAEGHDSGQPTCVVYVS
GEESVEQISSRAERMKIGANELYLYAGTEIEDILTKIQSLSPRALIVDSIQTVYLKEITG
SAGGLSQVRECTSALLRFAKKTNIPVLLAGHVTKSGDIAGPRVLEHIVDAVLYLEGEKCS
SHRLLRSVKNRFGSIDELGIFEMSQLGLQVVLNPSEMFLSDQNSDSEFLAGLAVAVIMDG
SRAFLIEIQALCVSSSTVSRHVNGIQASRADMLISVLAKQAGLKIQENAVFLNVVSGVSL
TETAGDLAIAASICSSFLEFPIPSGVAFIGEIGLGGELRMVSRMDKRVSTVAKLGYKKCI
VPMSAKKSLATLDLGELEIIGCNDLKGVINTVFTKN
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcatagaaatgaaagtgttgagatcaatttactacacccatactcacttcctt
catcgcaatctctccagaacccctgtttccctctccttattttcccgccatttccattcc
tccaatccgcgcttctctctaaattccctggaaaccgatgggacccaaagagcaccgcat
gcctggaccgcctacgagggactcacccccgacctttctacgcctaccaacagacacaaa
ggcattacccagggtaacgagtcggcttcaggagacgaaaccgatgcggattttgagacc
cataggacttatgggaaggcaaaaaatgctaatttgagcgatggagacaaaacccagatg
gccaaaaatgctcgttatatccccaatgaaaacactgatgggatgagtcgaaagaaggcg
ttctcggttaatgggttgggattgggggacatagttgggaataagaagaaaggaaaaagt
agagttaagtgggtttgtgagaattgtgggtactcagatggacagtggtggggagtttgc
cgttcttgcgatttttccgggacgatgaagaggttttcggaagtggagactaagaacaga
gggttggaattttcggaaactttggcgcggtcttggctaccaaaggatacaggggatgtg
gaacctgtaaaattgattgatgttaacagtggggttaagaagacggattaccggattcca
ctgtttggaccctttggaagtgaagttgctagagtgcttggaggtggccttgttcctggt
tccttggttttgattggtggtgatcctggtgttggaaagagcacccttctgttgcagatg
gctgcgctaattgctgaagggcatgactctggtcaacctacttgtgttgtatatgtatct
ggtgaagagagtgttgaacaaattagcagcagagccgaacgtatgaagattggagcaaat
gaactttacctttatgctggtactgagattgaggacatattgacgaaaattcagtccctc
tcaccacgggctctaattgttgattcaattcagacggtatacttaaaggaaattaccgga
agtgctggaggtctctctcaggtcagggaatgtacatcagctttattgcggtttgcaaag
aaaaccaacatcccagttcttttggctggacatgtaacaaaatctggtgatatagcagga
cctcgtgtcttggagcacattgtagatgctgtcttatatctggaaggggaaaagtgctca
tcacatcgtttgcttcgatctgtgaagaatcgttttgggtcaattgatgagctaggaata
tttgaaatgtcacaactgggactgcaagttgttttaaaccccagtgagatgtttttaagt
gaccagaactctgattcggagtttttagctggacttgctgttgctgtaattatggatgga
tctcgggctttccttattgaaattcaggccttgtgtgtatctagctcaacggtttctaga
catgtgaatggaatccaagcaagtagagctgacatgcttatctctgtccttgccaagcaa
gctggtctaaagatccaagagaatgctgtttttctaaatgttgtcagtggagtatcattg
acagagactgctggggatcttgcaatagcagcttcaatttgtagcagcttcttagagttt
cctattcccagtggagttgcattcattggtgaaattggccttggtggtgagcttcgcatg
gtatcaaggatggacaaaagagtaagcacagtggcaaaactaggatataagaagtgtata
gtgcccatgtcagctaaaaaatcattagcaactctggatttgggggagctggagattatt
ggctgcaatgatttgaagggggtcatcaatacagtgtttactaaaaattga
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