Gossypium hirsutum (upland cotton): 107897369
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Entry
107897369 CDS
T04793
Name
(RefSeq) vesicle transport v-SNARE 13
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107897369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107897369
Membrane trafficking [BR:
ghi04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
107897369
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Prominin
HAMP
Exonuc_VII_L
Fusion_gly
SNARE
DUF6076
Motif
Other DBs
NCBI-GeneID:
107897369
NCBI-ProteinID:
XP_016678297
UniProt:
A0A1U8IJF9
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Position
D04:7595829..7599506
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AA seq
221 aa
AA seq
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MSEVFEGYERQYCELSANLSKKCTASGALNGEKKKQKLSEIKARLEDAEALIRKMDLEAR
SLQPNVKAVLLAKLREYKSDLNNLKSEVKRIASGNLNPSARDELLESGMADALTASADQR
SRLMTTTERLNQSSDRIKDSRRTMLETEELGVSILQDLHSQRQSLLHANNTLHGVDDNIG
KSKRILTNMSRRMSRNKWIVGIIISLLIIAIIVILYFKLAK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagttttcgaaggatatgaacggcagtattgcgagctatccgcgaatctttcc
aagaagtgtacggcttctggtgctctgaatggagagaagaagaaacaaaaactttctgaa
ataaaagccagactagaagatgcagaagctctgattcggaaaatggaccttgaggcaaga
agcttgcagccaaatgttaaggctgtacttcttgctaagttacgggaatataagtcagat
cttaacaatctcaaaagtgaagttaaaagaattgcatctggcaatttaaatccatctgct
cgagatgagttgttggagtctggaatggctgatgccctcacggcatcagctgatcaaaga
tcaagattgatgacaactacagagcggttgaatcaaagcagtgacagaattaaggacagc
agaagaaccatgctggaaactgaagagcttggtgtttcaatacttcaagatttgcattcc
caacgacagtctctcttacatgccaataacacgcttcatggagtggatgacaacattggc
aagagcaagagaattttgacaaatatgtcgaggaggatgagccggaacaagtggatcgta
ggtatcattatatcactcctcatcattgctatcatcgttattttgtacttcaaacttgct
aaataa
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