Gossypium hirsutum (upland cotton): 107897394
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Entry
107897394 CDS
T04793
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107897394
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107897394
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107897394
03036 Chromosome and associated proteins [BR:
ghi03036
]
107897394
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107897394
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107897394
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107897394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
107897394
NCBI-ProteinID:
XP_016678335
UniProt:
A0A1U8IJQ9
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All DBs
Position
A10:7320142..7328281
Genome browser
AA seq
508 aa
AA seq
DB search
MNGGDEVVTAPAGPPQPLDWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLATGDRGG
RAVLFERTDTKDHDALRRDLERTDHSINRHPEFRYKTEFQSHEPEFDYLKSLEIDEKINK
IRWCQTANRALFLLSTNDKTIKFWKVQEKKVKKISEMNLDPPKAVGNGRVASSSNSNSPT
LCLANGGSSGNDFSFPPGGLPSLRLPVVVTSQETNLVARCRRVYAHAHDYHINSISNNSD
GETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSK
GSIRLIDLRQSALCDSHAKLFEEPEAPGSRSFFTEIIASISDIKFAKDGRYMLSRDYMAL
KLWDINMDSGPVSTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRI
FGCAPGSTEATTLEASKNPMRRQVQTPSRPSRSLSSITRVVRRGAETSGVDANGNSFDFT
TKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaggagatgaggtggtcacagctccggcaggcccgccacaaccattggattgg
aaattctctcaggtatttggtgaacgaacggctggagaagaagttcaagaagttgacatt
atttcagcaattgaatttgataaaactggggatcaccttgccactggtgaccgtgggggc
cgggctgttctctttgagaggacagataccaaggatcatgatgcactgagaagggatttg
gagagaacggaccactcaattaatcggcaccctgagttccgttacaagacagagttccaa
agccatgagcctgagtttgactatctcaagagcttggaaatagatgaaaaaatcaacaaa
atcagatggtgccaaacagccaatcgtgccctatttctcctttctacaaatgataaaacc
atcaagttttggaaggtacaagaaaagaaggtcaaaaaaatttctgaaatgaatttggac
cctccaaaagctgtaggaaatggccgtgtggctagttcaagtaattctaatagtcccaca
ctttgtcttgcaaatggaggttcctctggcaatgatttttctttcccaccaggaggcctg
ccatcattgcgtttgcctgtggtagtaacaagtcaggaaaccaacctagtagctagatgt
cgaagagtatatgcccatgctcatgattatcacatcaattccatttcaaataacagtgac
ggcgaaacttttatatcagctgatgatctgcgtataaatctttggaacttggaaatcagc
aatcaaagtttcaatattgttgatgtaaagcctgcaaacatggaggatctaactgaggtt
ataacatcagcagaattccaccctacccactgtaatatgttagcgtatagtagttcaaaa
ggctcaattcgtctcattgatttgcggcagtcagctttgtgtgattctcacgccaaatta
tttgaagaaccagaggcacctggttctagatcattttttacagagataattgcctcgatc
tcagatattaaatttgcaaaggacggaagatatatgcttagccgcgattacatggctctt
aagctgtgggacatcaatatggattctggtccagtttcaactttccaggttcatgaatat
ttgagacctaagctatgtgatttgtacgaaaatgattctatctttgacaaatttgagtgt
tgcctaagtggtgatggattgcgtgtggcaacaggttcctacagcaatctattccgtata
tttggttgtgcccctggaagcacagaggcaactactttggaagccagcaaaaatccaatg
aggagacaggttcagactccctcaaggccctctagatccctaagcagtataacacgtgtt
gttagacgaggagctgaaacctctggagtagatgcaaatggaaattctttcgatttcaca
acaaagttgctgcacctagcatggcacccaaccgaaaactcaatagcctgtgctgctgca
aatagcttgtacatgtactatgcataa
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