Gossypium hirsutum (upland cotton): 107897423
Help
Entry
107897423 CDS
T04793
Name
(RefSeq) myosin-17
KO
K10357
myosin V
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107897423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107897423
04131 Membrane trafficking [BR:
ghi04131
]
107897423
03029 Mitochondrial biogenesis [BR:
ghi03029
]
107897423
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
107897423
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
107897423
mRNA cycle factors
P-body specific factors
107897423
Membrane trafficking [BR:
ghi04131
]
Others
Actin-binding proteins
Myosins
107897423
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
107897423
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
107897423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
TSC22
nSTAND3
AAA_16
AAA_22
HSBP1
Laminin_II
DUF1664
Motif
Other DBs
NCBI-GeneID:
107897423
NCBI-ProteinID:
XP_016678364
UniProt:
A0A1U8IR63
LinkDB
All DBs
Position
A10:complement(6279152..6297920)
Genome browser
AA seq
1524 aa
AA seq
DB search
MAGPDNIIIGSHVWVEDPGLAWIDGEVIRINGNEIHVNTAHGKTVVTNISKAFPKDTEAP
PGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQY
KGATFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRS
GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLE
RSRVCQISDPERNYHCFYLLCAAPPEDIERYRLGSPKTFHYLNQSSCYELDGVNDAHEYL
ATRRAMDIVGINDEEQESIFRVVAAILHLGNINFAKGKEIDSSVVKDEKSRFHLNMTAEL
LRCDAQSLEDALIKRVMVTPEEIITRSLDPENAVASRDALAKTVYSRLFDWLVDKINVSI
GQDPNSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN
WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKL
SRTDFTISHYAGEVTYQANQFLDKNKDYVVAEHQALLTASECSFVRSLFPPLPEESSKSS
KFSSIGSRFKLQLQSLMETLSATEPHYIRCVKPNNVLKPAIFENFNVIQQLRCGGVLEAI
RISCAGYPTRRTFYDFLNRFGLLAPDVLEGNYDDKVACQLVLDKKGLKGYQVGKTKIFLR
AGQMAELDARRAEVLGNAARTIQRQIRTYIARKEFISLRGAAISLQSYLRGNMARKIYDE
LRREAGALNIQKNLRRHIDRKSYLTMRKSAILLQTGLRSMTARNEFRFRKQTKAAITIQA
HWRCYQAYSYYKSLQKAVLVSQCGWRCRVARRELKKLKMAARETGALKAAKDKLEKRVEE
LTWRLQLEKRLRADHEEAKAQEIAKLQDALHEMQSEVEEAKSMVIKEREAARKAIEEAPP
VVKETPVIVQDTEKINSLTSEVEKLKALLLAEKQTAKEAKQAHATEQAKNVDLTKKLDDA
GKKVDQLQDSVQRLEEKLSNLESENQVLRQQALSMSPTGRALAARPKTTIFQRTPENGNV
VNEEIKKALPNPQLTETEEKPQKSLNEKQQENQELLIKCISQDLGFSGGKPVAACLIYKC
LLHWRSFEVERTSIFDRIIQTIGASIEVADNNDLLSYWLSNSSTLLLLLQRTLKASGAAS
LTPQRRRSTSASLFGRMSQGLRGSPQTAGFSFLNGRLLGGLDDLRQVEAKYPALLFKQQL
TAFLEKIYGMIRDNLKKEISPVLASCIQAPRTSRASLGKGRSQANAVAQQALIAHWQSIV
KTLNNYLKTMRANYVPSFLICKVFTQTFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAE
LEQWCHDATEEFAGSAWDELKHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQLYRIS
TMYWDDKYGTHSVSSDVIASMRVKMTEDSNNAVSSSFLLDDDSSIPFSMDDISKSMQQIE
VAEIDPPPLIRGHSGFSFLLQHTE
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atggctggcccagataacataattataggttctcatgtatgggttgaagatcctggctta
gcatggattgatggagaagttattcgtatcaatggaaatgagattcatgttaacaccgca
catggaaaaactgttgtcacaaatatatcaaaagcttttccaaaggatacagaagcacca
cctggtggagtagatgacatgacaaagctttcatatttgcacgaacctggagttttgcaa
aacttggctacaagatatgaacttaatgagatctatacgtacaccggcaatatcctgatc
gcagtaaatccatttcaaagattacctcatctctatgatactcatatgatggaacaatat
aaaggagctacttttggagaactaagtccccatgtttttgcagttggtgatgctgcatat
agggcaatgattaatgaaggtaaaagcaattctattctggttagtggagaaagtggtgct
ggtaaaactgagaccacaaaaatgctcatgagatatcttgcattcttgggtgggcgatct
ggagtagaagggcgcacagttgaacagcaagttttggagtccaatccagttcttgaagca
tttggcaatgctaagacggttaggaacaacaattcaagtcgttttggtaaatttgttgaa
atccaatttgacaagaatggaaggatatctggggcagcaatcagaacctatttgcttgaa
agatctcgtgtttgccaaatttctgatcctgagaggaattaccactgcttttaccttctg
tgtgctgcaccacctgaggatattgaaagatataggttgggcagcccaaaaactttccat
tatctaaatcaatcaagttgctatgagttggatggtgtaaatgatgctcacgagtatctt
gcaacccgaagggctatggatattgttggaatcaatgacgaagaacaggagtcaattttt
agagtagttgctgcaattcttcaccttgggaacattaattttgccaagggaaaggaaata
gattcctcagttgtcaaggatgaaaagtctagattccaccttaatatgaccgccgaactt
cttaggtgtgatgcccagagcttggaagatgccctcatcaaacgtgtcatggtaactcca
gaagaaattatcacaagaagccttgaccctgagaatgcagttgccagcagggatgctttg
gccaaaacagtatattctcggttatttgactggcttgtggataaaattaacgtttcgatt
ggacaggatccaaactcaaagtcaataattggagttcttgatatttatggttttgaaagt
tttaagtgtaatagctttgaacagttttgcatcaacttcacgaatgaaaagctgcagcaa
catttcaatcagcatgtattcaagatggagcaggaagaatatacaaaagaagaaattaat
tggagctacatcgagtttgttgacaatcaagatgtcttggacctaattgaaaagaagcct
ggaggaataattgcgcttttagatgaagcctgcatgttccccaagtctacccatgagact
tttgcacagaagttgtaccagactttcaaaaataataagcgttttatcaaaccaaagctt
tcccgtactgattttaccatctcccactatgcaggggaggtaacctatcaagcaaatcag
tttctggacaaaaacaaagattatgtggtggctgagcatcaagctctgttgactgcatca
gagtgttcttttgtgagaagtctttttcctccacttccagaagaatcatcaaagtcatca
aaattttcttccattggatcgcgcttcaagctacaacttcaatctctgatggagaccttg
agtgctacagaaccccactacattagatgtgtgaaaccaaataatgtcctgaagcctgct
atttttgagaatttcaatgtcattcaacaactacgctgtggtggtgttcttgaagcaatt
aggatcagctgtgctggatatcctaccagacgtacattttacgattttctcaatcgtttt
ggtctacttgctccggatgttttggaaggaaattacgatgataaggttgcatgtcaactg
gtacttgataagaagggactgaaaggatatcaggtggggaagacaaagattttccttaga
gcaggtcagatggcagagttggatgctaggagagcagaggtgcttggaaatgcagccagg
accattcagcgacagattcgtacatatattgctcgcaaggaattcatctcattacgtggg
gctgctatcagtctgcagtcttatttgagaggtaatatggcacgcaaaatatatgatgaa
ctgaggagagaagctggagctttgaatattcagaagaatttgcgccgacacattgacaga
aaatcctatttgacaatgaggaaatctgcaattttattgcagacgggattaaggtcgatg
actgctcgcaatgagtttaggttcaggaagcagactaaagctgccattaccatacaggct
cactggcgttgctaccaagcttattcttattataagagtcttcagaaggctgtattagtt
tcacagtgtggctggaggtgcagagttgctagaagagagctcaaaaagctcaaaatggct
gcaagagaaactggagctttgaaggcggcaaaggacaagctagagaagcgggtggaggaa
cttacatggcgtctacaacttgaaaagcgattgagggctgatcatgaggaggcaaaagct
caagaaattgcaaaattgcaagatgcactgcatgaaatgcaatcagaagtggaagaagct
aaatctatggttatcaaggaaagagaggcagcacgaaaagccattgaggaagcacctcct
gttgtcaaagaaactcctgttattgttcaagatacagaaaagataaattcgttgacatct
gaagttgagaagttgaaggctttgctactggctgaaaagcaaacagctaaggaggcaaag
caagctcatgccactgagcaggccaaaaatgtggatctgactaagaagcttgatgatgct
gggaagaaagtagatcagcttcaagattcagtgcagaggctagaagagaagctctctaat
ttagaatcagagaatcaggtactccgtcaacaagcactctccatgtcaccaacaggcaga
gctttggcagcgagacccaagacgacaatttttcagagaactcctgagaatggtaatgtt
gtgaatgaagaaataaagaaagcgctaccaaatccacagttaactgagactgaggagaag
ccccaaaagtctcttaatgaaaagcaacaggagaatcaggaacttctaataaagtgtatt
tctcaagatttaggattctccgggggcaagcctgttgctgcttgcctaatatataaatgc
ctgctccattggagatcatttgaagttgaaagaacaagtatttttgatcggataattcaa
accataggggcatcaatagaggtggcagataacaatgacttgttatcctattggttatca
aattcatccactctactattgctgctgcaacgcacgctcaaagcaagtggtgcagcaagc
ctaactcctcaaaggcgaagatcaacttcagcttctctatttggaaggatgtctcaagga
cttcgaggttctccacaaactgctggtttctcatttcttaatggccggctgcttggtggt
cttgatgacctacgacaagttgaagcaaaatatccagctttgcttttcaaacagcaactg
acagccttccttgagaagatatatggaatgataagggacaatttgaaaaaggagatatct
ccagtgcttgcatcatgtattcaggcacccagaacttcccgggctagcctagggaaggga
cgttctcaagctaatgctgtggctcaacaagctcttattgcgcactggcaaagcatagtg
aaaactttaaacaattacttgaagacaatgagggccaattatgttccttcattcttaatt
tgcaaagtgttcactcagacattttcattcattaatgttcaattgtttaatagccttctt
ttgcggcgtgaatgttgctcattcagcaatggggagtacgttaaagctgggctagctgag
ctggaacaatggtgccatgatgcaactgaggagtttgcaggctcagcttgggatgagctg
aagcatattagacaagcagttggcttcctggtcatacaccagaagcccaaaaagaccttg
aaagagataaccaatgatctttgccctgtgcttagcatacagcagctgtacaggataagt
acaatgtactgggatgacaaatatggtacacacagtgtttcttcagatgtaattgcgagt
atgagagttaagatgactgaggactccaacaatgctgtcagcagttcatttttactggat
gatgattcaagcattccattctctatggatgatatctccaagtcaatgcaacaaatagag
gtggctgaaatcgatccgccacctctgattcgtggacactctggtttctcattcttgtta
cagcatacggaatga
DBGET
integrated database retrieval system
