Gossypium hirsutum (upland cotton): 107897487
Help
Entry
107897487 CDS
T04793
Name
(RefSeq) peroxisome biogenesis protein 1 isoform X1
KO
K13338
peroxin-1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107897487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107897487
Membrane trafficking [BR:
ghi04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
107897487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_lid_3
AAA_22
NACHT
NPHP3_N
AAA_5
ATPase_2
RNA_helicase
RuvB_N
AAA_14
nSTAND3
AAA_7
Mg_chelatase
IstB_IS21
Bac_DnaA
AAA_24
Parvo_NS1
AAA_18
TsaE
NB-ARC
PhoH
ATPase
AAA_30
Sigma54_activat
TIP49
ABC_tran
AAA_lid_PRS2_C
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
107897487
NCBI-ProteinID:
XP_040958798
LinkDB
All DBs
Position
D10:complement(4431841..4441680)
Genome browser
AA seq
1130 aa
AA seq
DB search
MEFEVRHVAGIEDCFVSLPLLLIQTLQSTRSSLLPPLLTLELRLPRASDDPWIVAWSGAT
SSSTAIEVSHQFAECISLPNHTTVQVRAASNLAKATLVTMEPDTEDDWEILELNSEHAEA
AILKQVRIVYEGMRFPLWLHGRTIITFHVISTFPKKAVVQLVPGTEVAVAPKRRKKNLNN
IESSTGESHGAKALLRLQDSDRRLFHKSNVKGVELGVALTSVAFIHQETAKRLSLESLQL
VVIVPRLSAKESVKNLENDASRMKGSLTSKEVNSGISIDNKEFRQVIVRLLISDSVAKGH
LMVTRSLRLYLRAGLHSWVYLKGYNAALKKEIPVLSLSPCHFKLVANDKAIGNGLEMLDR
HKTHRSQNLLPISGSGTSLGVVNWSTHENVVAALSSECPCQEAGDCNHQDNKKGLECLLQ
AWFLAQLDAIASNAGTEVNTLILGSESLLHFQVTIHDSGTYGLVSSNGFSEKRNKTKDLP
IEISYILTISEETLHSGQVNAYELSFDDGNKRVDVQGGVELFGKLTLGNPVSLCSVKDRT
SVKGFSTDVSSLSWMGATASDVINRLMVLLAPSSGIWFSTYNLPFPGHVLIYGPAGSGKT
LLARAVAKSLEEHEDLLAHVIFISCSGLSLEKAPTIRQALSSFISEALDHAPSVVVFDDL
DSIIQSSSDSEGSQPSTSVVALTKFLTDIMDEFGEKRKSSCGIGPVAFIASVQSLESIPQ
SLSSSGRFDFHVQLPAPAASERGAILKHEIQRRSLQCHDDIIMDVASKCDGYDAYDLEIL
VDRAVHAAVGRFLPSDSGSEEHMNPMLVRDDFSHAMHEFLPVAMRDITISAPDVGRSGWD
DVGGLNDIRDAIKEMIELPSKFPNIFAKAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSL
RFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRV
VNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPQERLDILTVL
SRKLPLASDVDLDAIAYMTEGFSGADLQALLSDAQLAAVHEHLSSANSNEPGKMPIITDT
VLKSIASKARPSVSEAEKQRLYGIYSQFLDSKRSAAAQSRDAKGKRATLA
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgaggtgagacacgtggctggaatagaagactgtttcgtatctcttcccctt
ttactcatccaaacccttcagtccacgcgctcttctctcctccctccccttctcactctc
gagcttcgcctcccacgcgcctccgacgatccttggattgtcgcttggtccggcgctact
tcttcttccaccgctatcgaggtttcacaccagtttgctgaatgtatatcgttgccgaat
cacaccacagttcaagtacgagcagcttctaatttggcaaaggctacgttagtcacaatg
gaacctgataccgaggatgattgggaaattttagagcttaactctgagcatgctgaagct
gcaatattaaagcaggtcaggattgtctatgaaggaatgcggtttcctctatggttacat
ggtcgaacaatcataaccttccatgtcatttcaacttttcccaagaaagcggtggttcaa
cttgtacctggaactgaagttgccgttgctccaaagagacgtaagaaaaatttaaacaac
atagaatcgtctactggagaatctcatggtgcaaaagcactgcttcgcttgcaagattca
gatagaagattgtttcataaaagtaatgtcaaaggtgttgagctaggggtagcacttacg
tctgttgcctttattcatcaagaaacagctaaaaggctttcattggagtctcttcagttg
gttgttattgtgccaaggttatcagctaaagagagcgttaagaatctggaaaatgatgcc
tctagaatgaaaggaagtttaacttcgaaggaagtaaatagtgggatttcaatcgataat
aaggaattccgacaagtgattgttcgccttttaatttcagattcggtcgctaaaggacat
ttaatggttacgcggtctctccgactttatttgagagcaggactacattcatgggtttat
ttaaaggggtataatgctgctttgaagaaggaaattcctgtactttcactttctccttgc
cacttcaaattggttgcaaatgataaggctattgggaatgggcttgaaatgcttgatcgt
cataaaactcataggtcacaaaacttactcccaatatctggttcaggaacctctttagga
gtagtaaattggtcaactcatgagaatgttgttgctgcactttcttctgaatgtccttgc
caagaagctggagactgcaatcatcaagacaataaaaagggcttagaatgtcttcttcag
gcatggtttcttgctcaacttgatgctatagcttcaaatgcagggacggaagttaacacg
ttgattttggggagtgaaagtctacttcactttcaggtgaccatacatgattctggaact
tatggacttgtctcatctaatggtttttcagagaagagaaataagacaaaggatttgcca
attgaaatttcatatatattgaccatctcagaggaaacactccacagtggacaagtcaat
gcatatgaactttcatttgatgatggaaacaagagggttgatgtccagggaggtgtagag
ttgtttggaaagctaactttgggtaaccctgtgtccttatgttctgttaaagacagaaca
tctgtcaaggggtttagcacagatgtatcttcattaagctggatgggtgcaactgcttct
gatgttatcaacagattgatggtgttgttggctccttcttctggaatttggtttagtact
tataatcttcctttcccaggacatgttctaatatatggtccagcgggttctgggaagaca
ttattggcaagagctgttgcaaaatcccttgaagaacatgaagacctgttagcacatgta
atctttataagctgctctggactttctttagagaaggctccaaccattcgtcaagcactt
tcaagtttcatatctgaagctctagatcatgctccttcagttgtcgtatttgatgatctt
gatagcatcatccaatcttcttctgactcagaaggatctcaaccttcaacctcagttgtt
gcacttactaaatttctcaccgacatcatggatgaatttggggaaaagagaaagagctct
tgtggtattggtccagtagcttttatagcttctgtgcaatctctggagagtatcccccag
tctttgagctcatcaggaaggtttgatttccatgtacaactgcctgcacctgctgcctct
gaacgtggggccatactgaagcatgaaattcagaggcgttccctacagtgtcatgatgat
atcataatggatgtagcttccaaatgtgatggatatgatgcatatgatctggaaatattg
gttgatagagctgttcatgctgctgttggccggtttttgccttctgattctggttctgaa
gaacacatgaaccccatgctagttagggatgatttctctcatgctatgcatgagttcctt
ccagttgccatgcgtgacataactatatcagctcctgatgttggtcgctctggttgggac
gatgttggtggtctcaatgacattcgggatgctatcaaagagatgatagaacttccttca
aagttcccaaatatatttgccaaagcgcctttaaggttgcgatctaatgttctgttgtat
ggtcctcctggttgtggcaagactcacattgttggtgctgctgctgctgcttgttcacta
agatttatatcagtgaaagggcctgaactactgaacaaatacattggtgcttctgagcaa
gctgttcgagatattttctctaaggcagctgctgctgcaccttgcctcctcttttttgat
gaatttgattccattgcccctaaaagaggacatgacaacactggagtaactgatcgagtt
gtcaatcaattcctaactgaattagatggtgttgaagttttgactggtgtatttgtgttt
gctgcaacaagtagaccagatctgcttgatgctgcattgctgagaccaggtaggcttgat
cgcctacttttctgtgattttccatctccgcaggaaaggttggatattctgaccgttctt
tcaagaaagttgccattggccagtgatgtcgatttagacgccatagcatatatgacagaa
ggatttagtggagctgatctccaagctcttctctcagatgcacagcttgctgcggttcat
gaacatttgagcagcgcgaatagcaatgagcctggcaaaatgccgatcataactgatact
gttctgaagtctattgcttccaaggcaagaccgtcagtttcagaagccgaaaaacagaga
ctgtatggaatctacagtcagtttctggattcaaagcgatctgccgccgcacagtcgagg
gatgcaaaaggcaagagggcaactctggcatga
DBGET
integrated database retrieval system
