Gossypium hirsutum (upland cotton): 107897768
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Entry
107897768 CDS
T04793
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00040
Pentose and glucuronate interconversions
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107897768
Enzymes [BR:
ghi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107897768
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107897768
NCBI-ProteinID:
XP_016678826
UniProt:
A0A1U8IL42
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Position
A10:112522703..112525199
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AA seq
330 aa
AA seq
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MASFPYADVDSTQRAIAGQAEGFGRFSVGGLHGPLVTVTTLSDDGPGSLRDACRKPGPGW
IVFKVSGIIRLSTYLSVDSHKTIDGRGERVKLTGKGLRLKECENVIVCNMEFEGGRGHDV
DGIQVKPNSKHIWIDRCSFKDYDDGLIDITRGSTDITVSRCYFTQHDKTMLIGADPTHVG
DRCIRVTIHHCFFDGTRQRQPRLRFGKVHLYNNYTRNWDIYAVCASVEAQIYSQCNIYEA
GKKKKTFEFYTEKAGDSEEASSGVIISEGDLFLNGAESCLLATGSGDGSVFHPSEYYKTW
TMEAPSDSLKQVLQVCTGWQPVPRPLDHHK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctttccgtacgccgacgtggacagtacccaaagagcaatcgccggtcaagcc
gagggcttcggccggttctccgtcggtggtctccacggccctctagtcacggtcaccact
ttatccgacgacggtccgggttctctccgagacgcttgccggaaaccgggaccgggttgg
atcgtgttcaaagtgtcgggaataatccgattatcgacgtacttaagcgtggactctcac
aagacaattgatggacgaggcgaaagggtaaagctgacagggaaagggttgagattgaaa
gaatgtgagaatgtgattgtttgtaatatggaatttgaaggtggaagaggacacgatgtt
gatgggattcaagtaaagccaaactcgaagcatatttggatcgataggtgtagttttaaa
gattatgatgatggcttgattgatattactagaggaagcactgacatcactgtttctaga
tgttacttcactcaacatgacaagacaatgctcattggagcagatcctacacatgtagga
gataggtgcatccgagtgacgatccaccattgcttcttcgatggaactcggcaaaggcaa
cctcgtcttagatttgggaaggttcatttgtataacaattacactcgaaactgggacatt
tatgctgtttgtgcaagtgtagaagcccagatatattctcaatgcaacatatatgaagct
ggaaagaagaagaaaacttttgagttttatactgagaaggcaggggatagtgaagaggcg
agttcgggtgtaataatatcggaaggagacctgtttttgaatggtgcagaatcatgctta
ttagcaacaggcagtggggacgggagtgtgttccacccaagtgaatattataaaacatgg
acaatggaagctccctcggactctttgaaacaagttcttcaagtatgcacaggttggcaa
cctgttcctcggcctcttgatcaccataagtga
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