Gossypium hirsutum (upland cotton): 107897970
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Entry
107897970 CDS
T04793
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 2
KO
K15559
regulator of Ty1 transposition protein 103
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107897970
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107897970
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
TEX13
Motif
Other DBs
NCBI-GeneID:
107897970
NCBI-ProteinID:
XP_016679039
UniProt:
A0A1U8ISZ2
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Position
A11:complement(40460309..40465044)
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AA seq
584 aa
AA seq
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MQAIDSSRSSNPFILCISSNLEIPFFAFSVGSTFYSFSTSGFKDPSPLQFGVFGGCGMNS
IFSEQILADKLSKLNSTQQCIETLSHWCIFHQSNAELVVATWDKQFHNSEMAQKVPLLYL
ANDILQNSKRKGNEFVNEFWKVLPAALKDLLENGDDRGKNVVSRLVGIWEERRVFGSRAR
SLKDVMLGEEVPPPLELSKKRPRSASVRIVKRDSRSIKTKLSIGGTAEKIVSAFHLILSE
QPNEDEEMSKCKSAVHRVRKMEKDVDVACSIAKDPKRKTLSKELEDEEKLLKECIEKLKS
VEANRAALVSQLKEALHEQESELENVRTQMQVAQAQADEAFNMRKRLSDEDFVSTSSATM
VLSIDANAKAGETPKLSAAAIAAEVADKLAASSSSQMIMHSVLSTFAAEEAKNVGLTKAS
TQSNSLNSVTDAISKSEKSLPVADSTALMQAQPLCAPINHSYQSVLVPQPAMQSQTTSSQ
PQYHMLPNIAAQQFLQSSGGTLTPYGTYGGMPPLPPGPPPPPPYMVSPMLPLPITQQQPI
PSGQQTASLTQQQLLPVTQQPPVPPSFRPLQPPGMVYYGHPPHS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccattgattcttcacgcagttcgaatcctttcattctctgcatttcctcaaac
ttggaaatacccttctttgctttctcagttggatccactttttattccttttccacttcg
gggtttaaagatccaagtccacttcaatttggggtttttggtgggtgtgggatgaatagt
atattcagtgaacagatacttgcagataagctttccaagctcaacagcactcaacagtgt
attgaaacattgtcacattggtgtatatttcaccaaagcaacgcagaactggttgttgca
acatgggataaacagtttcacaactcagagatggctcagaaagtccccttgttgtacctt
gccaatgatattctgcagaacagcaagcgtaaaggaaatgaatttgttaatgagttctgg
aaagtccttcccgcagccttgaaggaccttcttgagaatggtgatgatcgcgggaagaat
gtggtttccagattggtaggtatatgggaagaacgaagagtatttgggtcccgagcacga
agcctaaaagatgtgatgcttggtgaagaagtgcctccgccattggaattaagcaaaaag
cgtccacgctctgcatctgtcagaattgtgaagcgggactcaagatccattaaaacgaag
ttgtcaattgggggcacagctgaaaaaatagtttcagcatttcatttgatactcagtgaa
cagccaaatgaggatgaagagatgagcaagtgcaagtcagcagttcatcgagtgaggaag
atggaaaaagatgtggatgttgcctgttcaattgcaaaggatccaaaacggaaaaccttg
tccaaagaacttgaagatgaagaaaaacttctgaaagaatgcattgagaaactcaagtct
gtggaagcaaatagagcagcacttgtatcacagttaaaagaagctcttcatgaacaggaa
tcagagttagagaatgttcgtacacagatgcaggtagcacaagcacaggcggatgaagcc
tttaacatgcggaagcgtctcagtgatgaggattttgtttcaacgtcatctgctacaatg
gtcctatcaattgatgccaatgcaaaagctggagaaacacctaagctgagtgctgcagcc
attgcagctgaggttgcagacaagcttgctgcttctagctcctctcagatgatcatgcat
tctgttctctctacatttgcagctgaagaagccaaaaatgttggtctaacaaaggcgtcc
acacagtcaaactccctcaattctgtcaccgatgcaatttcaaaatcagagaagtcactg
ccagttgcagattctactgctcttatgcaagcacaaccactatgtgctccaataaaccat
tcttatcaatccgttcttgtgcctcaaccggccatgcaaagccaaaccacttcctctcag
cctcaatatcacatgcttcctaacatagctgcacaacaatttttgcagtcatcagggggg
acactaaccccatatggtacttatggtggtatgccacctttgccacctggaccaccaccg
ccgcctccctacatggttagtccaatgttaccattgccaataactcagcagcagccaata
ccatccggtcagcagacggcctctttgacccagcagcaactgctgcctgtaactcagcaa
ccacctgtacctcccagtttccggcctcttcagccaccgggaatggtgtactatggtcat
ccgcctcattcatag
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